XLOC_015557 (si:ch211-106h4.12)


Basic Information

Item Value
gene id XLOC_015557
gene name si:ch211-106h4.12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 31665836 ~ 31669111 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031098
TGCGTCTGGTCTGCAGAAAAGCAACAGGATGAAGGTGTGTGTGGAACTAGGGCTGCTGTGTCTTAGCCTGCTCATCTCCAGTCTTCATGGAGAAGAAATTGATACTGAATCAAGCAAACAAATGCCACCGAATCTTGATGAGGAGGATATTCCTCAGCTTCAGATGTACAGAGTGCGACGACAGACAGAGGAGAAAAATGAAGAAAAGTCAGTTGCTTCATCACAGAGAGAAAACAGCAAACATGTGTACCAAAAAACTCCACAATCAGGACAATTTTCCATTTTACGAGACAATGGAGGGCCAAagTCAGACGTCAACCTCCGCGTCAAGAGGcaggagaaaaacaaaaacaacaaacggAAAAAACCACGTCCTGCACAATTCAGCCTTTTAGGAAGCAATCAAGACCCGCCGCAGCAGACTGTCCGTGCCAAAAGAGAGGAGACTGCAGGAGGGAAAAGACCCTGACCAACCAGTTAAAGCATTAAATGTATCCTGTGTCTTTCCCCATGCAGGTTCCCTGATAAAGGAATTGCACAGGCACACATCACCATATATCAGAAAGTGTGTAAGCCTCAGGTTATGCTCGTGAAAGTATTCATTTATCTTTCTATTGCCATCTTTTctaagcaaatgcatttgcttgaTTATGTAAAGCTAAAAGTGGACACTAAGCGGCAGCATTTATCCAAGAGAGGAGCACTCGAGGCCTggcttggcttttttttttttttttttaacactatgTTAATTGATGCCTGttgatttttatattatatttacaataaagCATTTCATAAAAA
>TCONS_00031099
AGAAAAGCAACAGGATGAAGGTGTGTGTGGAACTAGGGCTGCTGTGTCTTAGCCTGCTCATCTCCAGTCTTCATGGAGAAGAAATTGATACTGAATCAAGCAAACAAATGCCACCGAATCTTGATGAGGAGGATATTCCTCAGCTTCAGATGTACAGAGTGCGACGACAGACAGAGGAGAAAAATGAAGAAAAGTCAGTTGCTTCATCACAGAGATCAGACGTCAACCTCCGCGTCAAGAGGcaggagaaaaacaaaaacaacaaacggAAAAAACCACGTCCTGCACAATTCAGCCTTTTAGGAAGCAATCAAGACCCGCCGCAGCAGACTGTCCGTGCCAAAAGAGAGGAGACTGCAGGAGGGAAAAGACCCTGACCAACCAGTTAAAGCATTAAATGTATCCTGTGTCTTTCCCCATGCAGGTTCCCTGATAAAGGAATTGCACAGGCACACATCACCATATATCAGAAAGTGTGTAAGCCTCAGGTTATGCTCGTGAAAGTATTCATTTATCTTTCTATTGCCATCTTTTctaagcaaatgcatttgcttgaTTATGTAAAGCTAAAAGTGGACACTAAGCGGCAGCATTTATCCAAGAGAGGAGCACTCGAGGCCTggcttggcttttttttttttttttttaacactatgTTAATTGATGCCTGttgatttttatattatatttacaataaagCATTTCATAAAAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-12 No description available

Ensembl:

ensembl_id ENSDARG00000092920

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031098 False 804 mRNA 0.42 6 31665836 31669111
TCONS_00031099 True 712 mRNA 0.42 5 31665850 31669111

Neighbor

gene id symbol gene type direction distance location
XLOC_015556 si:ch211-106h4.6 coding upstream 39627 31614533 ~ 31626209 (+)
XLOC_015555 si:ch211-106h4.4 coding upstream 58756 31597841 ~ 31607080 (+)
XLOC_015554 NA coding upstream 125246 31537338 ~ 31540590 (+)
XLOC_015553 cacnb2b coding upstream 146174 31475772 ~ 31519662 (+)
XLOC_015552 si:dkey-32m20.1 coding upstream 207976 31454562 ~ 31457860 (+)
XLOC_015558 ackr4a coding downstream 2434 31671545 ~ 31674403 (+)
XLOC_015559 NA coding downstream 114901 31784012 ~ 31786282 (+)
XLOC_015560 rnf182 coding downstream 135471 31804582 ~ 31805604 (+)
XLOC_015561 ranbp9 coding downstream 137491 31806602 ~ 31827960 (+)
XLOC_015562 epdr1 coding downstream 164886 31833997 ~ 31836902 (+)
XLOC_015549 NA non-coding upstream 373233 31291646 ~ 31292603 (+)
XLOC_015545 CT955962.3 non-coding upstream 448058 31100444 ~ 31217778 (+)
XLOC_015564 NA non-coding downstream 197388 31866499 ~ 31868755 (+)
XLOC_015567 NA non-coding downstream 350531 32019642 ~ 32127930 (+)
XLOC_015568 NA non-coding downstream 480010 32149121 ~ 32188991 (+)
XLOC_015569 NA non-coding downstream 595244 32264355 ~ 32266672 (+)

Expression


Co-expression Network