XLOC_015573


Basic Information

Item Value
gene id XLOC_015573
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 32644925 ~ 32647404 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033589
CAACTGCTCAAATCTGCCGCTACGAGTCTCAAGCGCTGTTTTTCACTTGCAAATCTACATTTCGCTCTCTCGCTCTTCTGCACCAAAAATCACTGTGACATTTGGTGCAAAAGTTACTTGTGTATCTGCCAACCAAAACGTGGGCTCTCAGAGAAATTCAGCCAATAGGGGATGGGGCGTGACGTCACCGCTCTAGCGCTGCGGAGGCTGAACGTCGAAACCGAAACCCCCTTTGCGAGATTCGCTGCATCTATACCTGATTTGCGTTCAAAAATGCCTGCTTAATTATTTCATAGTAGGAGCAAACATGCCTTAAGAAAAGGAGTAGGTTTGAAACTTTAGTAACCATAAAAAGTACGCCAGGTGGATGCCTTTCTACTCCAGGAAGCCGCAGCCTACGGCCTGAAGGAGGAAGAGGACGCGGTCAGTTTGAAATGTGAGTATTAAACCAAAGACAGTTCTTTGTGTTAAACTCGTATTTGTTGAGCTACTGTACAGTGCACTGTAGAATTGCTGAGGGTGTAAAGAGGCTTTAAATTAAAGTCTATTTTATTTCGCTGTAAATGTTGACTGTGTAATGTTACGGTCTCCAATCAGCACATATAAAGTAACGTTTCAAAGGTAAAAAAGATTATTATCAAATGTCTGACAGAAAAATGTGAAGTATTGCAGATCACAAGACTAAACAGACATCTGAGTGAGTGATGTATTTGTGCTGATGTAGAATCTGCTGTCAATTGACTGTTgccaatactgtttaaattagatACATGTATTCTTACTAAAAGAGAATAAAGGGTCATTTGTTTAATCTGTGCATCAGTATATAGTTGATCACTTGAGTAAGGTTTGTGTTACATCAGCAACTACACCAACATGTTATTTGAGCATGTGAATCAGAGGTGATTTATTCTAGTCTTTATGTTACAGGGAGGCTTTTATTGAGTACAGTACAGAAactacaaaaacatattttacatttgctatttattattagttattgtattttcaaACAGTGTTTACATTAGCTTTCTGattactggtgtgtgtgtgctttttctgcagagctgaatcgATGACATCCTGAAAGCAGCAATACAATTAAGGTACGTTTTCAttgcttcattttttaaaaccacttaTAGTTGTACAGTTTGATGTTAGTTTAAATATAACTATGTTAGTGATCAGTATTCATACCTAGGATAACAATTCTTGTTTTACGAAAGGTAACTTGGCTTGCTTGCCCTAATGTCATGTTTGCTATTTAGTCTTATCACATAATATGATTAAACTATTTAATtcataagctatatttattttagaaaaatggcAGACCAGGGTGCATCCAATgcattgaggtgaagttggttttattgttgcacattctgactttcttcttaataatttaatttcagaaaaagattttcaaattctatatagggaaatcatattagcagccaatgactatcaaaatacagcactgtccacagtcaaataaatattagttctaatgttgttttgaagtcattcagaccaaatatttaaagtaccatggtaaacaatatagggaccattaaaatgtttaaatgcaaatataaaccATCTTTACCTTAATAACTAACGCTACCATGTTTTATGATTCATTTTACACtccaaaaaatgtatgtttacttAACATTTTTACCAAGAATGTATTGCTAGTAATGATAAATGTGGACAATTAACTAAGTAAATCTACTAGTAGTCACTAGACAATGCATCTTATTTTCgtacatttctgtttaacaatgGGAATGCATACAATATTGaaagtattatcattatttattgaaaacaaacagaaacataattatattattaaaagaatGAATATGAGTAATCATGACAAATAAATACAAGTCACCAACACATGAAACCAAGCTTTATTCTAACAGTGATGTATTACAGACAGAAGCCCATGTTTTGCTGTATCTCCACACAGCTGGGCCAGTTCTTCAGATGATCAGAGGGACTTCGCCATCATCACATCCCTCATTGCTGCAGTCAGACTGAAACAGGACGGTGATGCATGGCAGTCCATGCCCGAGATACGGATGATGAAGAGACCACAGCAACATCTGGTCCAGATGAGGACACAAGGGCATGTGGACTGATGCAGGGTCTCGTTCAGTTCACTACAGGAGAACAGGAGTGGCTAAACTCAGTCTAGAACTGCTGCTGTCTTGCAGAGTTTAGTTGAAGTTGactctaaactctgcaggacaccagctgtccagaactgagtttgggcacccctgcattaCAGCATTTCCAAGATGCTGCTGCATGTGGACTTCTTTACCCTCACCACACACACCaatctgcagatatttcagatcaaacaaaacataaaaaacattcaaaaaacaaTGTCATTTTACTGTACAATGTGTCATTTGATTTCTGTAGTGCTAGTAATAAAATTATCCTACCTCTTA

Function

GO:

id name namespace
GO:0043034 costamere cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033589 True 2480 lncRNA 0.37 1 32644925 32647404

Neighbor

gene id symbol gene type direction distance location
XLOC_015572 NA coding upstream 7420 32637080 ~ 32637505 (+)
XLOC_015571 BX323559.6 coding upstream 36898 32604847 ~ 32608027 (+)
XLOC_015570 NA coding upstream 253951 32385688 ~ 32390974 (+)
XLOC_015569 NA coding upstream 378253 32264355 ~ 32266672 (+)
XLOC_015568 NA coding upstream 455934 32149121 ~ 32188991 (+)
XLOC_015574 BX323559.3 coding downstream 54416 32701820 ~ 32719974 (+)
XLOC_015575 klhl18 coding downstream 96403 32743807 ~ 32756706 (+)
XLOC_015576 BX323559.5 coding downstream 111259 32758663 ~ 32760332 (+)
XLOC_015577 zgc:136930 coding downstream 132734 32780138 ~ 32790887 (+)
XLOC_015578 ccr9a coding downstream 149469 32796873 ~ 32799083 (+)
XLOC_015583 NA non-coding downstream 206797 32854201 ~ 32862149 (+)
XLOC_015584 NA non-coding downstream 219171 32866575 ~ 33029428 (+)
XLOC_015586 NA non-coding downstream 575558 33222962 ~ 33235257 (+)

Expression


Co-expression Network