XLOC_015601



Basic Information


Item Value
gene id XLOC_015601
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 33759617 ~ 33771872 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033273
TGGAGCTTAACTGGAAGTGCAAATACTGTGTCATTTCTGACAGAAAGGACGGTGCGATGTCAGACATTGCTGATATATTCTCCGTGCCCTCTAAACTGTGAATTCATGCGAGACGGCAGGTAAACAGGTAAAATATGTGGGAGACAGTTGTGTATGTGTCACGTTGATAAGCGTCTCGGTTCTGCAAATGGTCACTACATATTCACCGCAGGAGTCTGATTTCCGGCACTGGTGGAGGTGCTGTGCTTCACACCAATTTCCTCTCTTCACCTGCCTGTACCCGAGAAATTCATCACTTTAGAAAACACTCAAATCTGTGGCCAGGCTTTCATTAGCTTTCTATCCTTGTGGCAAAGTCAGGCTTGTTCTTTTTTTCTACtgaagtccatccatccatcagtctacaCAGGTGATGATgcggaagtttccctccatcatccccatcaccaccaccaccaggttggcctcgtctccactcagggggttggcttcgccctgccttcatcttcaggcaggatctgccagctcatccagagttctgcactatagacggGGCTTACGCCAATAAACTTCATGAAAGGACTGTAATGAactctcattcatgcaaacaattcacaataaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033273 True 623 lncRNA 0.47 2 33759617 33771872

Neighbor


gene id symbol gene type direction distance location
XLOC_015600 BX649508.1 coding upstream 2049 33756378 ~ 33757568 (+)
XLOC_015599 si:dkey-31m5.7 coding upstream 6235 33751490 ~ 33753382 (+)
XLOC_015598 si:dkey-31m5.5 coding upstream 9327 33747509 ~ 33750290 (+)
XLOC_015597 si:dkey-31m5.5 coding upstream 30821 33726862 ~ 33728796 (+)
XLOC_015596 si:dkey-31m5.5 coding upstream 34289 33722547 ~ 33725328 (+)
XLOC_015602 kiss1ra coding downstream 24335 33796207 ~ 33821163 (+)
XLOC_015603 NA coding downstream 125598 33897470 ~ 33898732 (+)
XLOC_015604 NA coding downstream 127680 33899552 ~ 33908702 (+)
XLOC_015605 dre-mir-23a-3 coding downstream 128563 33900435 ~ 33900512 (+)
XLOC_015606 dre-mir-27a coding downstream 130453 33902325 ~ 33902455 (+)
XLOC_015593 NA non-coding upstream 78481 33680073 ~ 33681136 (+)
XLOC_015590 NA non-coding upstream 291447 33467112 ~ 33468170 (+)
XLOC_015586 NA non-coding upstream 524360 33222962 ~ 33235257 (+)
XLOC_015584 NA non-coding upstream 730189 32866575 ~ 33029428 (+)
XLOC_015610 NA non-coding downstream 409273 34181145 ~ 34356669 (+)

Expression



Co-expression Network