XLOC_015603


Basic Information

Item Value
gene id XLOC_015603
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 33897470 ~ 33898732 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033274
AAAACACATTACGTTATGAGTCACCCATTTCCAGAGCCTTTATGCTGAGCTCATTTAAGTCCTTTAtaatttaaaatcatacatttatgataatgaaatatttatatttcattcatttagagtTTTACAGATCCACATCCGTTCATTAAATAGCACTTGTTCATTTTCTGATTAGATCGTACAATTGAACTTGAATTGAACAAGTCTTTAATTGTCTACAACTGATGAGGCGCTTTCAAAAGTCCTTTCAAAAGCGATGTGACAATTATTTGGTTTTACTGAGCTTTTACTCGGGAACTCAACTAAGTTACACTTATTAAGCTGTCAAGGAGAAATGGAAAACACAATTTTCCCCACTTGAAACCTTTAAGCTTCTGAATGAGCGCTCGGTCAGTGAGCTTAACTAAACTTAGTCTGACTAATAGCTCTCGCTTGAatgacaaataaattaatttcaagacctgtaaatgtcatttaatgaTGGAAGTGTTTTATAACTGAGTGTCTCACTATAGTCTCTCTAAAGTACATGCTacctgGAAAGAATTTTATACctgaaatgatttttaaaaaaaaaagatacaaaaggATAACAACATTAGCAAATGTTTCAAACCAAATTTAATGTCCAGAATGAAGGCCATAGCTCAGtgttttttttagtgtttaacaaGTGAAGGCAcccttactgtaaataaaaagttaaacattatttaggttTTACACAGAAATATGATGCATATGCTGTATAGACACAGACACCTCTTCAAATAATTGGGTTAATTTTATAAAGGTTTTATAATATTTCCTCCAAATGTAGCAGAAACATTTTGGACAAGAATAACAAATATGTTTTTAGACATCACATTACTTTCTAGATAATACTATACCAATGTTTTCAACACCAAAAGAGTTACGAAAAAGAAATTTGGTGGAATAAACTGGATTCCAGTAACAACCAATGAAGACAAATGTCTTTGTCTGCCAAATAAATACAAGCAtttctaaacaaataaacagataaataaattaatgaataaacaaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033274 True 1046 lncRNA 0.31 2 33897470 33898732

Neighbor

gene id symbol gene type direction distance location
XLOC_015602 kiss1ra coding upstream 76307 33796207 ~ 33821163 (+)
XLOC_015601 NA coding upstream 125598 33759617 ~ 33771872 (+)
XLOC_015600 BX649508.1 coding upstream 139902 33756378 ~ 33757568 (+)
XLOC_015599 si:dkey-31m5.7 coding upstream 144088 33751490 ~ 33753382 (+)
XLOC_015598 si:dkey-31m5.5 coding upstream 147180 33747509 ~ 33750290 (+)
XLOC_015604 NA coding downstream 820 33899552 ~ 33908702 (+)
XLOC_015605 dre-mir-23a-3 coding downstream 1703 33900435 ~ 33900512 (+)
XLOC_015606 dre-mir-27a coding downstream 3593 33902325 ~ 33902455 (+)
XLOC_015607 kif2c coding downstream 27874 33926606 ~ 33952021 (+)
XLOC_015608 klhl20 coding downstream 213368 34112100 ~ 34126879 (+)
XLOC_015593 NA non-coding upstream 216334 33680073 ~ 33681136 (+)
XLOC_015590 NA non-coding upstream 429300 33467112 ~ 33468170 (+)
XLOC_015586 NA non-coding upstream 662213 33222962 ~ 33235257 (+)
XLOC_015610 NA non-coding downstream 282413 34181145 ~ 34356669 (+)
XLOC_015611 NA non-coding downstream 540713 34439445 ~ 34439731 (+)

Expression


Co-expression Network