XLOC_015643 (traj5)


Basic Information

Item Value
gene id XLOC_015643
gene name traj5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36097984 ~ 36098047 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031216
GAATACAAGGAAATTATAAGATTATATTTGGTGGCGGAACAAAACTCATCGTTGAACAAGGCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099504

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031216 True 64 TR_J_gene 0.34 1 36097984 36098047

Neighbor

gene id symbol gene type direction distance location
XLOC_015642 traj4 coding upstream 515 36097414 ~ 36097469 (+)
XLOC_015641 traj3 coding upstream 1197 36096728 ~ 36096787 (+)
XLOC_015640 si:dkey-161l11.75 coding upstream 1555 36096367 ~ 36096429 (+)
XLOC_015639 traj2 coding upstream 2017 36095905 ~ 36095967 (+)
XLOC_015638 si:dkey-161l11.74 coding upstream 2519 36095406 ~ 36095465 (+)
XLOC_015644 si:dkey-161l11.62 coding downstream 294 36098341 ~ 36098397 (+)
XLOC_015645 traj6 coding downstream 703 36098750 ~ 36098812 (+)
XLOC_015646 BX681417.3 coding downstream 922 36098969 ~ 36099028 (+)
XLOC_015647 BX681417.8 coding downstream 1163 36099210 ~ 36099272 (+)
XLOC_015648 si:dkey-161l11.76 coding downstream 1858 36099905 ~ 36099964 (+)
XLOC_015636 BX681417.2 non-coding upstream 3665 36092953 ~ 36094319 (+)
XLOC_015626 BX571812.1 non-coding upstream 266539 35831329 ~ 35831445 (+)
XLOC_015623 NA non-coding upstream 483686 35612555 ~ 35614298 (+)
XLOC_015619 FP236741.1 non-coding upstream 516693 35512002 ~ 35581291 (+)
XLOC_015618 NA non-coding upstream 595051 35482156 ~ 35502933 (+)
XLOC_015685 BX681417.1 non-coding downstream 19347 36117394 ~ 36117456 (+)
XLOC_015702 NA non-coding downstream 82196 36180243 ~ 36583275 (+)
XLOC_015703 NA non-coding downstream 146875 36244922 ~ 36247469 (+)
XLOC_015704 NA non-coding downstream 281192 36379239 ~ 36471110 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_14448323_14458776 NA coding CI01000004 null 14446505 ~ 14459181 (+)