Fish Transcriptome and Expression Database

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model fish

XLOC_015689 (si:dkey-161l11.78)

Basic Information

Item	Value
gene id	XLOC_015689
gene name	si:dkey-161l11.78
gene type	coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007113.7
NCBI id	CM002886.2
chromosome length	59640629
location	36118795 ~ 36118857 (+)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031269
TGTCTAATAACTATGGAGGGAAACTCATTTTTGCTCAAGGAACAAACCTGCTTGTTCTTGCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000099170

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00031269	True	63	TR_J_gene	0.38	1	36118795	36118857

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_015688	BX681417.21	coding	upstream	333	36118397 ~ 36118462 (+)
XLOC_015687	traj47	coding	upstream	784	36117949 ~ 36118011 (+)
XLOC_015686	traj46	coding	upstream	1076	36117657 ~ 36117719 (+)
XLOC_015685	BX681417.1	coding	upstream	1339	36117394 ~ 36117456 (+)
XLOC_015684	traj45	coding	upstream	1732	36117004 ~ 36117063 (+)
XLOC_015690	BX681417.18	coding	downstream	266	36119123 ~ 36119188 (+)
XLOC_015691	traj10	coding	downstream	685	36119542 ~ 36119604 (+)
XLOC_015692	si:dkey-161l11.79	coding	downstream	1406	36120263 ~ 36120325 (+)
XLOC_015693	traj51	coding	downstream	1763	36120620 ~ 36120676 (+)
XLOC_015694	BX681417.23	coding	downstream	2024	36120881 ~ 36120946 (+)
XLOC_015646	BX681417.3	non-coding	upstream	19767	36098969 ~ 36099028 (+)
XLOC_015636	BX681417.2	non-coding	upstream	24476	36092953 ~ 36094319 (+)
XLOC_015626	BX571812.1	non-coding	upstream	287350	35831329 ~ 35831445 (+)
XLOC_015623	NA	non-coding	upstream	504497	35612555 ~ 35614298 (+)
XLOC_015702	NA	non-coding	downstream	61386	36180243 ~ 36583275 (+)
XLOC_015703	NA	non-coding	downstream	126065	36244922 ~ 36247469 (+)
XLOC_015704	NA	non-coding	downstream	260382	36379239 ~ 36471110 (+)
XLOC_015705	NA	non-coding	downstream	433835	36552692 ~ 36564473 (+)
XLOC_015707	NA	non-coding	downstream	520074	36638931 ~ 36642762 (+)

Expression

Co-expression Network