XLOC_015724 (gpr160)


Basic Information

Item Value
gene id XLOC_015724
gene name gpr160
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37295088 ~ 37296159 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031321
CCCTTTCAATGAGGAACTGCCATTCATTTTCACACAAGACTTTCAGGTGTTGTGATTTCTGCCCTGGATTATGTCTTACCATGGAAACCTCAGTGCCTTCACTCCTTCTGGTTCTCTGGCTTAAGAATGTGCTGAACTGGGTGTTGGTTGTGGTGCTGAGGCACCACATGAGCCGGACTTTCTCTGGAATTTTCTGCATTTCTTTAACATTAATTGACAGCCTCTTGAGTTTTGTCCTCACGGCTATTTTCTACCTGGAAGACTTTAACATCTCAGGCTGGCACATCACCGGGAGCCACATATGCCTGCTGGCTCAGATCGCATGCCTCATCTATAGAGTGACCAACTGGCCAGTGTTCCTCCTTGTCGGACTTGATAACTTCTGGACACTATCTTCAAGCTCAACAAACACACGGAAACTGACTTACGCTGCTGGAGTGGCTCTGCTTTGGACTGCAACGGCTCTGTATGTTTTCTGGACGCCCGGTGTTGTTGTATTATTAGAGGGTGATAATGAGAATCCCCAGTGTAAGATGTTTAGCAGCACCCAGAGCTCTCAGGTCCTCGTGGCGTTGCTGACGACGACCACCTGCGTCATTCTGTACTCGTACGCACCGGTGGACAAATGCAGGACTCTGCGCGACCCCGAGCAGCGCTGTTTGCTTTGTTTACGGCGGGTTATGCAGACGTTCATGAGCACGTGGGCGCCGTTCCCCGTACTGTTGATCGTGTCTCCGCTGCTGCAGGTGGAGATGCACGCGCTCCTGCAGGTGAATGTCTTCTGGCTGTGTTTTCTCAACAGCTTCTGCGTCGCTTTGACTCTGTGCGGTCGCTCTTTTGCGCCCAAATACACAAAAAGCGACACCTTCACCGACGGCTTTTGTTCCTGGAGCGTTTGCTGTACTTGCGGAGCTGATGAGCGGAGTTATGGACAACTAACTGGAGCCCGCGAACAAGTTAAAACACTCACTATCTGACCGTGTTTGCTCTGAATGAACATCATCTGCTGTGTGCGTTACAGTAATAAACACGTATGGGTTTGCAATTTAAATGATTTGTGCAGGGctgtttg

Function

symbol description
gpr160 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Orthologous to human GPR160 (G protein-coupled receptor 160).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043235 receptor complex cellular_component

KEGG:

id description
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-081022-189 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Orthologous to human GPR160 (G protein-coupled receptor 160).

Ensembl:

ensembl_id ENSDARG00000038700

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031321 True 1072 mRNA 0.50 1 37295088 37296159

Neighbor

gene id symbol gene type direction distance location
XLOC_015723 sec62 coding upstream 29185 37245382 ~ 37265903 (+)
XLOC_015722 samd7 coding upstream 52551 37227011 ~ 37242537 (+)
XLOC_015721 apoda.2 coding upstream 79099 37207461 ~ 37215989 (+)
XLOC_015720 copa coding upstream 89008 37176814 ~ 37206080 (+)
XLOC_015719 pex19 coding upstream 148516 37134281 ~ 37146572 (+)
XLOC_015725 NA coding downstream 5249 37301408 ~ 37307571 (+)
XLOC_015726 phc3 coding downstream 128102 37424261 ~ 37428875 (+)
XLOC_015727 phc3 coding downstream 134758 37430917 ~ 37436938 (+)
XLOC_015728 sppl2 coding downstream 184510 37480669 ~ 37503009 (+)
XLOC_015729 MYADM coding downstream 453857 37750016 ~ 37755128 (+)
XLOC_015713 dre-mir-2198 non-coding upstream 541330 36753649 ~ 36753758 (+)
XLOC_015712 NA non-coding upstream 551176 36742343 ~ 36743912 (+)
XLOC_015707 NA non-coding upstream 652326 36638931 ~ 36642762 (+)
XLOC_015705 NA non-coding upstream 730615 36552692 ~ 36564473 (+)
XLOC_015704 NA non-coding upstream 823978 36379239 ~ 36471110 (+)
XLOC_015733 NA non-coding downstream 530575 37826734 ~ 37827039 (+)
XLOC_015734 AL954692.1 non-coding downstream 540460 37836619 ~ 37846849 (+)
XLOC_015737 LO017954.1 non-coding downstream 630221 37926380 ~ 37927412 (+)
XLOC_015738 NA non-coding downstream 671826 37967985 ~ 37971044 (+)

Expression


Co-expression Network