XLOC_015734 (AL954692.1)


Basic Information

Item Value
gene id XLOC_015734
gene name AL954692.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37836619 ~ 37846849 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031331
AGCGAAAGGAAGCTCACTGTAGAGGTCACTTACTGAGTGCTCGTCACTCGCCAACACCTCGGGGAAGGTCTGAGACAGGAGCTCCTCGCTGACCTAGCAGGACATCATCTGAATGATGAGCGAGTGCACAGAAAATCGGGTCACGCGCGCGACTCTCGCAGCAGACGTTGATGCTCGCACACATTCAGCGGATCAACTGAATGACGCGCGCAGACTTGGAAACACTCGCGGCTGGCGAATGAGTGCGATGTGTGAGCTAGCATAACATGCTAGAACCCAATTCAGACTACTCTCCCTCCGCT
>TCONS_00031332
GACGCGCGCAGACTTGGAAACACTCGCGGCTGGCGAATGAGTGCGATGTGTGAGCTAGCATAACATGCTAGAACCCAATTCAGACTACTCTCCCTCCGCTCTTTTCACATCATTTATTACTAAGAATGACATGGAAGTTTGACTGACATATTACTCACCCGGATCGCTTCTTTCAAAGACAAAGCCACATGGCACCTTGAACATTTCACAAACACTCGACTTCCCAGTAAATGCATGCTTTATTCTCGTTTATTAAAACCTGCGTACAAATGAAATTCTACTTTAAAGACAACACAACATGGTAACATCGGTGTACGGACGCATGCTCAAGCAGTCGTTTTACCGACTTCAAAATAAATCCGTGTAGAAACAAATCGGTCAATTCGTTCCTAGACAGGAGTCCGCTCTGTTATACTTTTCGCGCCATTTAAAACGCCCCAGTTGTGCTCTGTGATCTGAGCTGTTTTCCGGGAACATGCGACGAACAAGGAGTTGCAGGGACAAGTCTGTGGCAGATTCAGGCAGTGAAGCTTCAGAGGCGAAGACGGTTTGGCAGTGGAAAGGGGATGAAGATGAATGGGAACCGTATCCTTCAGAGGTCTGCGAACAGCTGGATGCAGCAAAGCAGGCTGGTGAAAAGTCTGTTTCGCTTGCGCTCGGACCTGGTTACGTAGTGGATCTTGTGAAAATGACTCAGACTAATACTGTCAGCAAGTACAAACGAAAAATACGCCTTCAGAAAGTGAAGTCAGAAGATCTGAATGAAGGGAATGCTTTGAATGGTAATAAAAAAGCAACAGGTGTTGTTCAGattaaagaagaaaaagaggaggaagaggagcagCCCGTTTCCAAGAAGAGACGCAATGAAGGGAGGAGTCAGAAAGCGAACAAAGACAAACCTGTGGTAAAAGAAGAATGTGAAGTTGTGAAGACACTGGTTATGAAGGGCAAAGCCCCTGTTGATCCAGAATGCAAGGCTAAATTGGGAAAGGCACATGTCTACAACGAGGGTGCTGATGTGTATGATGTTATGCTTAATCAGACTAATCTCCAGTTCAACAATAACAAATATTATCTGATCCAACTTCTTGAAGATGACAGTGCAAAAGCCTACAGTGTGTGGTTGAGGTGGGGACGAGTGGGCAAAGTAGGACAGAACAATCTGGTTAGCTGTGGGGCAAATCTAGCTCAGGCCAAAGACACCTTCAAAAAGAAATTTTTTGACAAGACCAAGAACGAGTGGGAGCATCGAGCAAGTTTTGAGAAAGTTGCAGGAAAATATGACATGGTATTTATGGACTACAGCACTGAAGACAAGGGAGAGGAGAAAGCTGTGGTTCCCTCTGCTACTCAAAAAAAGCCTTGCCAACTGAACAGCAAGGTCCAGTCTCTCCTAGAGCTCATTTGTGATCTCAAAGCCATGGAGGAGTGTGTGCTGGAGATGAAGTTTGACACCAAAAAAGCCCCACTCGGAAAACTAACAGCAGAGCAAATTCGTGCTGGCTATGCCTCACTGAAAAGAATTGAGGAGTGTTTAAAGAAGAAAGGGAGTAACAAGGAGCTTTTGGATGCATGCAACCAGTTTTACACCCGCATCCCTCATGATTTTGGGTTGCGGACACCCCCAATAATTCGCTCAGAGGAGGAGCTGAAGGAGAAAATTACTTTGCTCGAGACTCTAAGTGACATTCAGATAGCGGTTAAAATGGTTCAGTCTAATGTTAAGAGTGACGAGCATCCTTTAGACAGACAGTATCACTCTCTTAACTGCCAACTGCAACCACTGGATACTGACAGCAATGAATACAAGGTTATAGAGAAATATCTCAAGTCCACCCATGCACCCACCCATACTGACTACACAATGACTCTTCTGGATGTCTTTGCTGTGGAACGAGAGGTCGAGAAGGACAACTTCAACTCTGAGCTGCAAAACAGGATGCTCCTGTGGCACGGCTCTCGTCTGTCAAACTGGGTGGGGATCCTGAGTCAGGGTCTGCGAGTGGCCCCTGCAGAGGCTCCTGTGACTGGATACATGTTTGGTAAGGGGATCTATTTCGCAGACATGTCATCCAAAAGTGCCAATTACTGCTTTGCCAGTCAGAAGAACAACCAGGGACTCTTGTTGCTGAGCGAGGTTGCCCTTGGAGATAGTAATGAACTTTTGGACGCAGATTACAATGCCGACCAACTGCCTTCTGGGAAGCATAGCACAAAAGGTCTGGGTCAAACTGCACCAGACCCCAAAAAATCAGTTTCATTGAATGGTGTGACTGTGCCCTTGGGACCCTCTGTGAAGACCGGTGTTGGCCAGAAAGGAGGATACTCTCTTCTTTATAATGAGTACATTGTTTATAACCCTGCTCAGATTCAGATGAAGTACCTCCTTAGAGTTCAGTTTAACTTCTCATCACTTTGGTGAGCTTCACATTTTGCACACAGACAGTCTGAACAGTTTGAGGTGAAGGAAAAAACATGTAGCTATGTAGTGTTTCCCTCCAGGAAAAATGTGCATATTGTAACATTAATGTCTGTTTTAACTTTCAAAGGAACCTGAATATGACTAATATGGGACATTTTCTAAgtgatgaatgaattaatcaaaataaaatgatatttcTACCGA
>TCONS_00031333
TAAAACGCCCCAGTTGTGCTCTGTGATCTGAGCTGTTTTCCGGGAACATGCGACGAACAAGGAGTTGCAGGGACAAGTCTGTGGCAGATTCAGGCAGTGAAGCTTCAGAGGCGAAGACGGTTTGGCAGTGGAAAGGGGATGAAGATGAATGGGAACCGTATCCTTCAGAGGTCTGCGAACAGCTGGATGCAGCAAAGCAGGCTGGTGAAAAGTCTGTTTCGCTTGCGCTCGGACCTGGTTACGTAGTGGATCTTGTGAAAATGACTCAGACTAATACTGTCAGCAAGTACAAACGAAAAATACGCCTTCAGAAAGTGAAGTCAGATCTGAATGAAGGGAATGCTTTGAATGGTAATAAAAAAGCAACAGGTGTTGTTCAGattaaagaagaaaaagaggaggaagaggagcagCCCGTTTCCAAGAAGAGACGCAATGAAGGGAGGAGTCAGAAAGCGAACAAAGACAAACCTGTGGTAAAAGAAGAATGTGAAGTTGTGAAGACACTGGTTATGAAGGGCAAAGCCCCTGTTGATCCAGAATGCAAGGCTAAATTGGGAAAGGCACATGTCTACAACGAGGGTGCTGATGTGTATGATGTTATGCTTAATCAGACTAATCTCCAGTTCAACAATAACAAATATTATCTGATCCAACTTCTTGAAGATGACAGTGCAAAAGCCTACAGTGTGTGGTTGAGGTGGGGACGAGTGGGCAAAGTAGGACAGAACAATCTGGTTAGCTGTGGGGCAAATCTAGCTCAGGCCAAAGACACCTTCAAAAAGAAATTTTTTGACAAGACCAAGAACGAGTGGGAGCATCGAGCAAGTTTTGAGAAAGTTGCAGGAAAATATGACATGGTATTTATGGACTACAGCACTGAAGACAAGGGAGAGGAGAAAGCTGTGGTTCCCTCTGCTACTCAAAAAAAGCCTTGCCAACTGAACAGCAAGGTCCAGTCTCTCCTAGAGCTCATTTGTGATCTCAAAGCCATGGAGGAGTGTGTGCTGGAGATGAAGTTTGACACCAAAAAAGCCCCACTCGGAAAACTAACAGCAGAGCAAATTCGTGCTGGCTATGCCTCACTGAAAAGAATTGAGGAGTGTTTAAAGAAGAAAGGGAGTAACAAGGAGCTTTTGGATGCATGCAACCAGTTTTACACCCGCATCCCTCATGATTTTGGGTTGCGGACACCCCCAATAATTCGCTCAGAGGAGGAGCTGAAGGAGAAAATTACTTTGCTCGAGACTCTAAGTGACATTCAGATAGCGGTTAAAATGGTTCAGTCTAATGTTAAGAGTGACGAGCATCCTTTAGACAGACAGTATCACTCTCTTAACTGCCAACTGCAACCACTGGATACTGACAGCAATGAATACAAGGTTATAGAGAAATATCTCAAGTCCACCCATGCACCCACCCATACTGACTACACAATGACTCTTCTGGATGTCTTTGCTGTGGAACGAGAGGTCGAGAAGGACAACTTCAACTCTGAGCTGCAAAACAGGATGCTCCTGTGGCACGGCTCTCGTCTGTCAAACTGGGTGGGGATCCTGAGTCAGGGTCTGCGAGTGGCCCCTGCAGAGGCTCCTGTGACTGGATACATGTTTGGTAAGGGGATCTATTTCGCAGACATGTCATCCAAAAGTGCCAATTACTGCTTTGCCAGTCAGAAGAACAACCAGGGACTCTTGTTGCTGAGCGAGGTTGCCCTTGGAGATAGTAATGAACTTTTGGACGCAGATTACAATGCCGACCAACTGCCTTCTGGGAAGCATAGCACAAAAGGTCTGGGTCAAACTGCACCAGACCCCAAAAAATCAGTTTCATTGAATGGTGTGACTGTGCCCTTGGGACCCTCTGTGAAGACCGGTGTTGGCCAGAAAGGAGGATACTCTCTTCTTTATAATGAGTACATTGTTTATAACCCTGCTCAGATTCAGATGAAGTACCTCCTTAGAGTTCAGTTTAACTTCTCATCACTTTGGTGAGCTTCACATTTTGCACACAGACAGTCTGAACAGTTTGAGGTGAAGGAAAAAACATGTAGCTATGTAGTGTTTCCCTCCAGGAAAAATGTGCATATTGTAACATTAATGTCTGTTTTAACTTTCAAAGGAACCTGAATATGACTAATATGGGACATTTTCTAAgtgatgaatgaattaatcaaaataaaatgatatttcTACCGA
>TCONS_00031334
TGACTCAGACTAATACTGTCAGCAAGTACAAACGAAAAATACGCCTTCAGAAAGTGAAGTCAGATCTGAATGAAGGGAATGCTTTGAATGGTAATAAAAAAGCAACAGGTGTTGTTCAGattaaagaagaaaaagaggaggaagaggagcagCCCGTTTCCAAGAAGAGACGCAATGAAGGGAGGAGTCAGAAAGCGAACAAAGACAAACCTGTGGTAAAAGAAGAATGTGAAGTTGTGAAGACACTGGTTATGAAGGGCAAAGCCCCTGTTGATCCAGAATGCAAGGCTAAATTGGGAAAGGCACATGTCTACAACGAGGGTGCTGATGTGTATGATGTTATGCTTAATCAGACTAATCTCCAGTTCAACAATAACAAATATTATCTGATCCAACTTCTTGAAGATGACAGTGCAAAAGCCTACAGTGTGTGGTTGAGGTGGGGACGAGTGGGCAAAGTAGGACAGAACAATCTGGTTAGCTGTGGGGCAAATCTAGCTCAGGCCAAAGACACCTTCAAAAAGAAATTTTTTGACAAGACCAAGAACGAGTGGGAGCATCGAGCAAGTTTTGAGAAAGTTGCAGGAAAATATGACATGGTATTTATGGACTACAGCACTGAAGACAAGGGAGAGGAGAAAGCTGTGGTTCCCTCTGCTACTCAAAAAAAGCCTTGCCAACTGAACAGCAAGGTCCAGTCTCTCCTAGAGCTCATTTGTGATCTCAAAGCCATGGAGGAGTGTGTGCTGGAGATGAAGTTTGACACCAAAAAAGCCCCACTCGGAAAACTAACAGCAGAGCAAATTCGTGCTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-031113-6 Predicted to enable NAD+ ADP-ribosyltransferase activity and protein ADP-ribosylase activity. Predicted to be involved in double-strand break repair and protein poly-ADP-ribosylation. Predicted to act upstream of or within protein ADP-ribosylation. Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in brain; head; and proliferative region. Orthologous to human PARP2 (poly(ADP-ribose) polymerase 2).

Ensembl:

ensembl_id ENSDARG00000079202 ENSDARG00000084661

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031331 False 302 ribozyme 0.55 1 37836619 37836920
TCONS_00031332 False 2629 mRNA 0.44 18 37836821 37846849
TCONS_00031333 False 2198 mRNA 0.45 18 37837249 37846849
TCONS_00031334 True 813 mRNA 0.43 9 37838259 37841561

Neighbor

gene id symbol gene type direction distance location
XLOC_015733 NA coding upstream 9580 37826734 ~ 37827039 (+)
XLOC_015732 sdr39u1 coding upstream 12192 37815687 ~ 37824427 (+)
XLOC_015731 ltb4r2b coding upstream 24434 37804235 ~ 37812185 (+)
XLOC_015730 ftr66 coding upstream 66288 37762924 ~ 37770331 (+)
XLOC_015729 MYADM coding upstream 81491 37750016 ~ 37755128 (+)
XLOC_015735 cbln13 coding downstream 27922 37874771 ~ 37878304 (+)
XLOC_015736 tep1 coding downstream 50230 37897079 ~ 37906118 (+)
XLOC_015737 LO017954.1 coding downstream 79531 37926380 ~ 37927412 (+)
XLOC_015738 NA coding downstream 121136 37967985 ~ 37971044 (+)
XLOC_015739 apol1 coding downstream 124504 37971353 ~ 37974725 (+)
XLOC_015725 NA non-coding upstream 529048 37301408 ~ 37307571 (+)
XLOC_015713 dre-mir-2198 non-coding upstream 1082861 36753649 ~ 36753758 (+)
XLOC_015712 NA non-coding upstream 1092707 36742343 ~ 36743912 (+)
XLOC_015707 NA non-coding upstream 1193857 36638931 ~ 36642762 (+)
XLOC_015740 NA non-coding downstream 128147 37974996 ~ 37990505 (+)
XLOC_015741 NA non-coding downstream 152930 37999779 ~ 38000194 (+)
XLOC_015751 NA non-coding downstream 434133 38280982 ~ 38283096 (+)

Expression


Co-expression Network