XLOC_015737 (LO017954.1)


Basic Information

Item Value
gene id XLOC_015737
gene name LO017954.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37926380 ~ 37927412 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031339
aattataacctTTCTGTGCATCTTTCAGTGGTATTATATATTCATTTCTACTGTATCTAACTTTTTCCTCAGCACATCTTTGGGTTCAGTCAGATCCTCAGGGGAAAGACACGTTTCTTCAGTCTGATGCTGATGGTCTTTCCCATCTCTGTGCTCATCTGGTCAGTGCCGTCCTGCTCTCTTCTTTATACCTTTCAGCTTCAGTGTTTATATGAGGTTATAATAGATGTctattctctctctttctctctgctcaGATGAATAGTCATCAGTGGGAGCCTTTATGTTTTCTGCTGTCCAGTTTCTACTTCCTCTATGCTAATGTGAGGCATGGACTTCTTCACCAACTCCTGGAGACCTACAGTTTATTCTCACAAAAATATACGACTCAGCTGCACTCCAAAACAGTTAATAGGAAGGATTTTGAAGACTGTCTGAATTTTCTGCAGCGCCACAGTCTTCTCCTCTCACAGTGGCCGGCTCTCTTTGTACAAACGGCTCTTAATGAATCATGTGACAGCTCTGCGCATTTGTGGGCTGAAAACATGACAAGAAATGCAAGCGTGCAAGCTGTAAAATGGCTAAACTACACGGATGCAGCACACAAAGAAGTTAGGTAAAAATACTGAGCTTTAATACTCTTATTCTCATATTGCAAGTTTAAGCTAAATTTaaatctagatcaggggtgtcaaactcaattcctggagggccgaagccctgcacagtttagttccaaccctgctccaacacacttacctgtaggtttcaaacaagcttgaaggactcaattagtt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117380

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031339 True 797 lncRNA 0.42 3 37926380 37927412

Neighbor

gene id symbol gene type direction distance location
XLOC_015736 tep1 coding upstream 20262 37897079 ~ 37906118 (+)
XLOC_015735 cbln13 coding upstream 48076 37874771 ~ 37878304 (+)
XLOC_015734 AL954692.1 coding upstream 79531 37836619 ~ 37846849 (+)
XLOC_015733 NA coding upstream 99341 37826734 ~ 37827039 (+)
XLOC_015732 sdr39u1 coding upstream 101953 37815687 ~ 37824427 (+)
XLOC_015738 NA coding downstream 40573 37967985 ~ 37971044 (+)
XLOC_015739 apol1 coding downstream 43941 37971353 ~ 37974725 (+)
XLOC_015740 NA coding downstream 47584 37974996 ~ 37990505 (+)
XLOC_015741 NA coding downstream 72367 37999779 ~ 38000194 (+)
XLOC_015742 dcaf8 coding downstream 75305 38002717 ~ 38020603 (+)
XLOC_015725 NA non-coding upstream 618809 37301408 ~ 37307571 (+)
XLOC_015713 dre-mir-2198 non-coding upstream 1172622 36753649 ~ 36753758 (+)
XLOC_015712 NA non-coding upstream 1182468 36742343 ~ 36743912 (+)
XLOC_015751 NA non-coding downstream 353570 38280982 ~ 38283096 (+)
XLOC_015753 NA non-coding downstream 443123 38370535 ~ 38371944 (+)

Expression


Co-expression Network