XLOC_015741


Basic Information

Item Value
gene id XLOC_015741
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37999779 ~ 38000194 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033287
gaaatgccaactgacccagccgggactcaaaccagcgtccttcttgctgtgctaaccactgagccactgtgtcacccttcTTAAGTAAGCTTAAAaagtataatatatttatatattttatctgCATGCTGAGGATAAATTGGAGACACGTCGACGTCTCTAATGTTAAACCATCCTTTTCATAACGATTCACGTTCTATGTCAATATATTTAGGTCACCTGTGAATAACGTTACATTTACATTGAACATTGACGCCATTTTAGAATTGTATAATAATCtagtgaacttttaagttgttaGGGTTTATATAGTAACAAATATCACTCACCTCACTCATAGTTCTGAGATGTGCTGAAATAGCCGTTTGACTTCGCGGGTTAATTTGTGACGTGACTTTGGATCAACGAAGAATCCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033287 True 416 lncRNA 0.38 1 37999779 38000194

Neighbor

gene id symbol gene type direction distance location
XLOC_015740 NA coding upstream 9274 37974996 ~ 37990505 (+)
XLOC_015739 apol1 coding upstream 25054 37971353 ~ 37974725 (+)
XLOC_015738 NA coding upstream 28735 37967985 ~ 37971044 (+)
XLOC_015737 LO017954.1 coding upstream 72367 37926380 ~ 37927412 (+)
XLOC_015736 tep1 coding upstream 93661 37897079 ~ 37906118 (+)
XLOC_015742 dcaf8 coding downstream 2523 38002717 ~ 38020603 (+)
XLOC_015743 hnrnpc coding downstream 25066 38025260 ~ 38034190 (+)
XLOC_015744 casq1a coding downstream 39663 38039857 ~ 38054482 (+)
XLOC_015745 si:rp71-1g18.1 coding downstream 55335 38055529 ~ 38066173 (+)
XLOC_015746 sall2 coding downstream 147567 38147761 ~ 38157339 (+)
XLOC_015734 AL954692.1 non-coding upstream 152930 37836619 ~ 37846849 (+)
XLOC_015733 NA non-coding upstream 172740 37826734 ~ 37827039 (+)
XLOC_015751 NA non-coding downstream 280788 38280982 ~ 38283096 (+)
XLOC_015753 NA non-coding downstream 370341 38370535 ~ 38371944 (+)
XLOC_015755 NA non-coding downstream 415823 38416017 ~ 38422233 (+)
XLOC_015762 AL953896.1 non-coding downstream 1035988 39036182 ~ 39046184 (+)
XLOC_015763 NA non-coding downstream 1051693 39051887 ~ 39052229 (+)

Expression


Co-expression Network