XLOC_015755


Basic Information

Item Value
gene id XLOC_015755
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 38416017 ~ 38422233 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033288
tacacgacaagctaactggacaaactgattgcggccggaaagccctccacatggaggtaagtggtcagctggtaagggcgaaaaggaacagcgtcataccgcttCTTAGCGTTTGCCATATGTACCTCCAAATAcctaatttgcggtctccagaaacatccacgggactacattttcagaatgagcctgggttgagttaAAGTTAGTTCAAGATTAGcgcatgcattaactcatcattagttcataatctagtaatgtttagtttagatattaacacattattaattatgtactgttattgtaaagtgttactcaaAAACGCACTACTTGGGGTAAATACAAGGGTTAATGTATAGCATAGTGACAGCtgttgtaccttttttttttttaaagggcctTTTCTGGCTGAATTTAGATTGATTGTCAACATGAATGTGGCCTTTTCTGCAGCGACAGAATAATAAGCCAATCAGTGATGAAGagaacacagacacacattatCACAATGACAGGGTAAAAGGCCAATCAAAGCGCAAGTGAGACACTTTCTCGTTCTCACTTAACTTTTAACCTGTATGTTGTCATTTAAGACAGGCTATGTCAATGTGAAAGTCGTGTCAGTGTTGCAGAGATGGCTGGACAGTTGCTGTATGCACCAGTTCAACTCATgttttttaatatgcattttgttttatttctgcagaGTCCATTATGTTCTCATCCAGATTTGTTCTTGTCTCTCTAGCCTCTTTAGAGAAAATGCCTCTGGCAAAGACTATTATGCAGTGTCCCCAAAAAATATCTGGACATATAAGCCATGCTCAAAATGTATTCCACTGCAGcaaggaaaaaaaagtaaaaaaaaaagATTTGGCTTTCATCTCATTAATTGGCAAATCTGTGCTGCGCTGGGAGCTCGCAGGAACACCATAAGGTCTGGGCTGGATACCAAGCCTCAAGCTGAATGCCTCCGGATGCCTAACTGATGCGTCAGCGTGGGAAATGAGATGAAGGGGCAGACGTCCCGTGCTTCATCATGCTCCTCATCCTCCTCCACCCCCAATATGCTGGAGACAGCTGGAGCGGCGCTCATCAGCAGAGGCAGATAGTGGAGAGGCTGCAAGGCGGTGCGCAGGTGTCTCCGAATCCATGGAAAGAGCTGCCGAATGACTGGGAAATTGAGCCTCCAGGGTATAGATGTTGTCACTCTCCATCGAGTTCCATTATCACTGTTGGTGTAAATGGGCTAAATTGACCTGGAAGTGGCTAATTGTTCCGACATATGACTTTTGACGCATGTTTGTCATGAGCTGAGTCTTTTTGATGCCTGGTCTACTTTAGGTGACCTTTTGTTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033288 True 1356 lncRNA 0.43 2 38416017 38422233

Neighbor

gene id symbol gene type direction distance location
XLOC_015754 psmb5 coding upstream 23442 38373272 ~ 38392575 (+)
XLOC_015753 NA coding upstream 44073 38370535 ~ 38371944 (+)
XLOC_015752 nedd8l coding upstream 126266 38288308 ~ 38289751 (+)
XLOC_015751 NA coding upstream 132921 38280982 ~ 38283096 (+)
XLOC_015750 homeza coding upstream 140359 38271392 ~ 38275658 (+)
XLOC_015756 cdh24b coding downstream 132027 38554260 ~ 38709083 (+)
XLOC_015757 FQ377660.1 coding downstream 309463 38731696 ~ 38741768 (+)
XLOC_015758 carmil3 coding downstream 320105 38742338 ~ 38890677 (+)
XLOC_015759 si:ch211-119o8.4 coding downstream 470398 38892631 ~ 38909401 (+)
XLOC_015760 rem2 coding downstream 502742 38924975 ~ 38977298 (+)
XLOC_015741 NA non-coding upstream 415823 37999779 ~ 38000194 (+)
XLOC_015740 NA non-coding upstream 425512 37974996 ~ 37990505 (+)
XLOC_015738 NA non-coding upstream 444973 37967985 ~ 37971044 (+)
XLOC_015762 AL953896.1 non-coding downstream 613949 39036182 ~ 39046184 (+)
XLOC_015763 NA non-coding downstream 629654 39051887 ~ 39052229 (+)
XLOC_015764 CU179756.1 non-coding downstream 637402 39059635 ~ 39070308 (+)
XLOC_015767 NA non-coding downstream 1363514 39785747 ~ 39792446 (+)
XLOC_015768 CU929371.1 non-coding downstream 1634666 40056899 ~ 40057016 (+)

Expression


Co-expression Network