XLOC_015770



Basic Information


Item Value
gene id XLOC_015770
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 40218564 ~ 40222006 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033620
acacatcataccttgaggcagataggctacagcagcagaagatcacaccggttGTCACTCCTGTCACCTAAGAAaacatgATGGACCTCCAATGAGTTGTTGCCTCAGACTTAGAGACAGAAAACTGCATTTGGACAAAATATTGAACTACAGGATACAAACTGAAGATTTGTGTCCGATAAGAGCAGTCTTATTCCAGACGGTCGCTGGGAAGACGCTCTGTTCTGATCCTGAAAGTAGCTGGACAAAGAGTGCCATGTGGAAGGTGGATGAGGAACAGAGGAAGCTCAGAGGACAGATTCCTGAAGCTGTAGAGGGAGCTTCAGTGGACGGATGCAAAGGAAGAGAAGATCCAATGACAACAGCAGAAATGCCACTAAATAGCAGAGTGCTGCTCACAAAAATGCAGACGACTAAACAAAAGAACTCACAAACAACTGCAAAAGCCCAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033620 True 451 lncRNA 0.45 3 40218564 40222006

Neighbor


gene id symbol gene type direction distance location
XLOC_015769 FP236331.1 coding upstream 33877 40181633 ~ 40184687 (+)
XLOC_015768 CU929371.1 coding upstream 161548 40056899 ~ 40057016 (+)
XLOC_015767 NA coding upstream 426118 39785747 ~ 39792446 (+)
XLOC_015766 zgc:136870 coding upstream 597461 39618951 ~ 39621103 (+)
XLOC_015765 clstn2 coding upstream 662897 39108339 ~ 39555667 (+)
XLOC_015771 NA coding downstream 42619 40264625 ~ 40274512 (+)
XLOC_015772 epha4b coding downstream 72307 40294313 ~ 40514151 (+)
XLOC_015773 NA coding downstream 548066 40770072 ~ 40772051 (+)
XLOC_015774 NA coding downstream 761287 40983293 ~ 40985305 (+)
XLOC_015775 BX510333.1 coding downstream 814070 41036076 ~ 41036191 (+)
XLOC_015764 CU179756.1 non-coding upstream 1148256 39059635 ~ 39070308 (+)
XLOC_015763 NA non-coding upstream 1166335 39051887 ~ 39052229 (+)
XLOC_015762 AL953896.1 non-coding upstream 1172380 39036182 ~ 39046184 (+)
XLOC_015776 NA non-coding downstream 1008910 41230916 ~ 41249001 (+)

Expression



Co-expression Network