XLOC_015776


Basic Information

Item Value
gene id XLOC_015776
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 41230916 ~ 41249001 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031378
AGGCCTTCTGTTCAAATCTATCTGTGCTGTTCCGTGTGCCTTCAGCAGATCTCATTTGTGAGACGTCCGTCAGCTGTCAGAAAAGCTTGAATGCTCTAATGGTCTGCTGAATTCAACACACCATCAGGAAATAAAGGTAATGAAAAAGGATGAGAGATTTCTGTGCGAGATGGAGGAACAGAAGGAGATGATATCACTCCTCCTGTGATGCACTCGCCCCCTTTCCACCAAGCCTTTGCCAGTGCTGCAGTTTCTATCTCTATAATATTCAAGTAATCCCCGCTGAGGAAAGTCGAGGAGTCGGCAACACACTGTCACTTCAACTCTGTTTCTCAGGCTCGTGGGAAATCAAAGAAGAGAAAGCAAGAAAGAGACAGAGAGGAAGCTGGAACAGGAGAGGGGAAGGCGTAGAGAGAAAATGATCacactaaacaaacaaatttgcCACATTCGTGCGAAAGCGGCAAATGCTTCCTATCCACCATCACAGAAGTTCTGTGttacttaaagggttagttaacATTGACTTCCCATGTCAATGTCATtatatttctttctcttttttggacaataaataaataaataaatactgttcaAATACATCcatgctcatttaaaaaaaaaaaaaaaattagatgcaAGACTGTCAACGAATGGTTCCATGTGACACATCGCATGTGTTCTAGGAGTATACAATAGGGTTTAATAAGAAACATTAAATTGCATGTACTAAATAAAAGCCTGACCTTGACTTTTAGTTTTCATGCTTGGCTGTGCTTTCATGAAACTCTATTAGGGCTGTAATTCATGCCGACTCACCCAGAAATGGCACACAAGTGTACCGTTCTGataaatcaatattaataaatcataataGAAATTCCCCCCAAAAAGTATCCATCTAGTTTCTTCATGGAGTTTAACCTCTTAGACAAATGTATGTtgatttttttgcagtttcagAAAAATGTCTGAAGCATGCAttttcaatgagcctgtgttgcaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031378 True 1007 lncRNA 0.39 3 41230916 41249001

Neighbor

gene id symbol gene type direction distance location
XLOC_015775 BX510333.1 coding upstream 194725 41036076 ~ 41036191 (+)
XLOC_015774 NA coding upstream 245611 40983293 ~ 40985305 (+)
XLOC_015773 NA coding upstream 458865 40770072 ~ 40772051 (+)
XLOC_015772 epha4b coding upstream 716765 40294313 ~ 40514151 (+)
XLOC_015771 NA coding upstream 956404 40264625 ~ 40274512 (+)
XLOC_015777 acvr1l coding downstream 275237 41524238 ~ 41543762 (+)
XLOC_015778 NA coding downstream 329067 41578068 ~ 41583029 (+)
XLOC_015779 NA coding downstream 522110 41771111 ~ 41795569 (+)
XLOC_015780 crlf1a coding downstream 627594 41876595 ~ 41920632 (+)
XLOC_015781 odf3l2a coding downstream 677706 41926707 ~ 41934019 (+)
XLOC_015770 NA non-coding upstream 1008910 40218564 ~ 40222006 (+)
XLOC_015783 NA non-coding downstream 764075 42013076 ~ 42013350 (+)
XLOC_015798 NA non-coding downstream 1161887 42410888 ~ 42422644 (+)
XLOC_015799 BX005044.1 non-coding downstream 1174683 42423684 ~ 42423799 (+)

Expression


Co-expression Network