XLOC_015791 (ftr02)


Basic Information

Item Value
gene id XLOC_015791
gene name ftr02
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42236118 ~ 42242734 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031397
GTCGTTGTTGAGGCTAACGTTACCTGTGAGAACGCACAAAATGGCTGAATCCAGTGTTTCTTTGGCTCAAGATCAGTTCAACTGTTCAATCTGTCTGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGTGCTGTATTTCAGGTTATTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCATTAGGGAAAAATACCATGCTGGTTGAAGTGGTGGAGAAACTCAGGAAGAGAAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAATCTGCAGATGTGGAGTGTGATGTTTGTACTGGAGACAAAAACAAAGCCACCAAGTCCTGTCTGATGTGTCTGAACTCTTACTGCCAAAATCATCTTGAACAACATGAGactttctttaaaattaaaagaCACAATCTGATGGACGCCACTGGACGACTGCAGGAGATGATCTGTCCTCAACATGAGAAACTACTAGGTATTTTTTGTCGTACTGATAAGCGCTGTATTTGTTATCTGTGTACAATGGATGAACACAAAACCCACGACACTGTATCAGCTGCAGCAGAGAGGACTGACAAACAGAAATATTTTGAAGAGACACTTAAGAAGAGAATCATGGAGAACCAGAAGGAGCGTGAGGAGCTAAGAGCGGCTCTAGAGTCTCACAAGCGCTCTGTACAGGCAACAGTGGAGGACACTGAGAGGATCTTTACTGAGCTCATCTGCTCCATTGAGAGAACACGCTCAGAGGTGACACAAGTGATCAGAGATCAGGAAAAAGCTGCAGTGAGTGGAGCTGAAAGACGACTGAAGAAGCTAGAGCAGGAGATTGATGATCTGAAGAGGAGAAACACTGAGCTGGAGCAGATTTCAAACACAGATAATCACATCCATTTCCTCCAGAATTTCCAGTCTTTCTCTGTTCCCCCTGAATCTACAGACACCAGCATCAGATCTCGTCTCTCATTTGATGATTTGGTAACGTTTGTCTCTCAGGTGAAAGAGAAACTGCAGCAGACTGTTAAACAAGagcaaaaaaacatatttcacaTAGTGAGACACATCAATGTGATGCCAAGCCCTCAAAATAAGAGCCGGAATGACTTCCTACAATggctgcacagtggtgcagtgggtagcaagttCGCCTCaacacaagaaggtcgctggttcgatccgcGGCTGGAtccgttggcgtttctgtgtggagtttgcatttttctTCCCTTGTTCCTCCctgtttcctccaagtgctccagtttctcccacaagtccaaagacgtggtacaggtgaattgggtaagctaaattgtgcatagtgtatgtgtgtaaatgagtgtgtatggatgtttcccagagatgggttgcagctggaagggcatctgctgcgtaaaacatgctggataaattggcggttcattccgctgtggcggcccagattaataaagggactaagctgaaaagaaaatcaatgaatgatttTCGGTTATAAACTATACAATTttttgtaaattagcagttttccttattttctttttaattattaatttgggCTTTTTCACCTTTTATGGACAAAacagtattcaccttattcttcaccGACTAGCGGGTGCagccattttaatctttttggctcgagacttctggtcttattcacttccattcatttttagacattaaaaactgcttgtttcgctgtttgatgttgcaaactgatatttgcttattatattatgctactcggtctgtatagtcatgcaaacatttgtttgtagagcaagtagtttgaccgttttctgccgtttattattcctagttatttgtcccataggcaactgaatcgaaagttttaagacaatcgcgaaaacaggcgcacttccgcattttagaataagttCAATAGAGTATTGACAgaaaagtgtggggagcagagagaggggaagaatcAGCATAGGACGTCAAGGCATAAATTGAACTCAGGTCTCCGTGAGCAGGAGCGAATatgtcaacgcactaaccactacaccattgaCGCCGACCAGTTTTCTTTATTTCCttttatgggaccttgatctttcttcaaaCAATTTTTAACCTTGAAAACCTTGAGCTCGAGGATCTCcaagttcagggctctctccctggacagcataccaaacacgctccataataaatcatcagctaagggcgaactcttgaaatcaCATTTCAAAACCTGATCTGATATTTGTTAGTGTATATGTATGGCTTATGTGTGCTGTTGtcattgttttaaatgtatactATATGCTATGTGTggttttctattatttttattctgttataattttcattttactGTTCAGCACTTTAGTCTGCTGCTCGCTGGTtgtaaagtgctttataaataaagttaaatgaatgaatgaattaatcaggTATTATTAGAATTCTGTTCAGAATCATGTAATAATGGACTGTATGTAAGAGCTGGAGATGTTTAAAGACCTATAATCACAGTTACTGAACTAATAATTCATGATGTTtccttaatgt
>TCONS_00031398
TGTTGAGGCTAACGTTACCTGTGAGAACGCACAAAATGGCTGAATCCAGTGTTTCTTTGGCTCAAGATCAGTTCAACTGTTCAATCTGTCTGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGTGCTGTATTTCAGGTTATTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCATTAGGGAAAAATACCATGCTGGTTGAAGTGGTGGAGAAACTCAGGAAGAGAAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAATCTGCAGATGTGGAGTGTGATGTTTGTACTGGAGACAAAAACAAAGCCACCAAGTCCTGTCTGATGTGTCTGAACTCTTACTGCCAAAATCATCTTGAACAACATGAGactttctttaaaattaaaagaCACAATCTGATGGACGCCACTGGACGACTGCAGGAGATGATCTGTCCTCAACATGAGAAACTACTAGGTATTTTTTGTCGTACTGATAAGCGCTGTATTTGTTATCTGTGTACAATGGATGAACACAAAACCCACGACACTGTATCAGCTGCAGCAGAGAGGACTGACAAACAGAAATATTTTGAAGAGACACTTAAGAAGAGAATCATGGAGAACCAGAAGGAGCGTGAGGAGCTAAGAGCGGCTCTAGAGTCTCACAAGCGCTCTGTACAGGCAACAGTGGAGGACACTGAGAGGATCTTTACTGAGCTCATCTGCTCCATTGAGAGAACACGCTCAGAGGTGACACAAGTGATCAGAGATCAGGAAAAAGCTGCAGTGAGTGGAGCTGAAAGACGACTGAAGAAGCTAGAGCAGGAGATTGATGATCTGAAGAGGAGAAACACTGAGCTGGAGCAGATTTCAAACACAGATAATCACATCCATTTCCTCCAGAATTTCCAGTCTTTCTCTGTTCCCCCTGAATCTACAGACACCAGCATCAGATCTCGTCTCTCATTTGATGATTTGGTAACGTTTGTCTCTCAGGTGAAAGAGAAACTGCAGCAGACTGTTAAACAAGagcaaaaaaacatatttcacaTAG

Function

symbol description
ftr02 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-5 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000079412

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031397 False 2584 mRNA 0.41 6 42236118 42242734
TCONS_00031398 True 1098 mRNA 0.44 4 42236123 42239901

Neighbor

gene id symbol gene type direction distance location
XLOC_015790 si:ch211-235o23.1 coding upstream 11415 42212948 ~ 42224703 (+)
XLOC_015789 ift57 coding upstream 25592 42200390 ~ 42210526 (+)
XLOC_015788 cavin4a coding upstream 37518 42191592 ~ 42198600 (+)
XLOC_015787 tmeff1a coding upstream 49000 42176922 ~ 42187118 (+)
XLOC_015786 cyp7b1 coding upstream 83983 42135719 ~ 42152135 (+)
XLOC_015792 ftr06 coding downstream 4826 42247560 ~ 42250254 (+)
XLOC_015793 ftr04 coding downstream 17287 42260021 ~ 42334707 (+)
XLOC_015794 ftr10 coding downstream 29096 42271830 ~ 42273108 (+)
XLOC_015795 ftr06 coding downstream 52210 42294944 ~ 42308424 (+)
XLOC_015796 ftr08 coding downstream 75278 42318012 ~ 42321154 (+)
XLOC_015783 NA non-coding upstream 222768 42013076 ~ 42013350 (+)
XLOC_015779 NA non-coding upstream 440549 41771111 ~ 41795569 (+)
XLOC_015778 NA non-coding upstream 653089 41578068 ~ 41583029 (+)
XLOC_015776 NA non-coding upstream 987117 41230916 ~ 41249001 (+)
XLOC_015775 BX510333.1 non-coding upstream 1199927 41036076 ~ 41036191 (+)
XLOC_015798 NA non-coding downstream 168154 42410888 ~ 42422644 (+)
XLOC_015799 BX005044.1 non-coding downstream 180950 42423684 ~ 42423799 (+)
XLOC_015800 BX294109.1 non-coding downstream 344004 42586738 ~ 42587035 (+)
XLOC_015802 NA non-coding downstream 374127 42616861 ~ 42624890 (+)
XLOC_015803 NA non-coding downstream 402654 42645388 ~ 42645994 (+)

Expression


Co-expression Network