XLOC_015793 (ftr04)


Basic Information

Item Value
gene id XLOC_015793
gene name ftr04
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42260021 ~ 42334707 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031401
ATGGCAAAACCCAGTGTTTATTTGGCTCAGGATCAATTCAGATGTTCAGTCTGTCAGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCAAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGAGAATATCAGGAAGAGAAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAATCTTTAGATGTGGAGTGTGATGTTTGTACTGGGAGAAAATATAAAGCTGTTAAATCTTGTCTGGTGTGTCTGGAATCTTACTGTCTGATTCACTTTGAACAACACGAGGAAATTCACCCTGGAAAGCGTCACAAAGTGACTGATGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAGACTACTAGAAATGTACTGCAGGACTGACCAGCGCTGTATTTGCATGCTGTGCTTGATGAATGAACACAAAACCCATGAAACTGTGTTACCAGCTGAAGAGAGAGCAGAGAAACAGAAACACTTGAAAGAGAGCCAGAGCAAACTCCAGCAGAGAATCCAGGAGAGACAGAAGGAGTGTGAGGAGCTGAGAGTGTCTCTAGAGACTCACAAGGTGAGTTTTGAGCAGAAGATCAGCTGCTGGCTGCTGGAAGAGCTGTTTGAGACTCAGTTAGAACTGTCCTGCAGTCAGTCAGTGAGGAGCCCAGTGCTGGAGCACTTTGAGTCCCACTGA
>TCONS_00031402
ATGGCAAAACCCAGTGTTTATTTGGCTCAGGATCAATTCAGATGTTCAGTCTGTCAGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCAAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGAGAATATCAGGAAGAGAAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAATCTTTAGATGTGGAGTGTGATGTTTGTACTGGGAGAAAATATAAAGCTGTTAAATCTTGTCTGGTGTGTCTGGAATCTTACTGTCTGATTCACTTTGAACAACACGAGGAAATTCACCCTGGAAAGCGTCACAAAGTGACTGATGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAGACTACTAGAAATGTACTGCAGGACTGACCAGCGCTGTATTTGCATGCTGTGCTTGATGAATGAACACAAAACCCATGAAACTGTGTTACCAGCTGAAGAGAGAGCAGAGAAACAGAAACACTTGAAAGAGAGCCAGAGCAAACTCCAGCAGAGAATCCAGGAGAGACAGAAGGAGTGTGAGGAGCTGAGAGTGTCTCTAGAGACTCACAAGCGCTCTGTACAGGCAGCAGTGGAGGACACTGAGTCGATGTTTAATGAGCTCATCCAGTTCATTGAGAGAACCTGCTGTGAGGTAACACAAATGATCAGAGATCAGGAAAAGGCTGCAGTAAGTGGAGCTGAAGGACGACTGAAGCAACTGGAGCAGGAGATTGATGATCTGAAGAGGAGAAACACTG
>TCONS_00031403
ATGGCAAAACCCAGTGTTTATTTGGCTCAGGATCAATTCAGATGTTCAGTCTGTCAGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCAAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGAGAAACACTGA
>TCONS_00031404
ATGGCAAAACCCAGTGTTTATTTGGCTCAGGATCAATTCAGATGTTCAGTCTGTCAGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCAAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGAGAATATCAGGAAGAGAAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAATCTTTAGATGTGGAGTGTGATGTTTGTACTGGGAGAAAATATAAAGCTGTTAAATCTTGTCTGGTGTGTCTGGAATCTTACTGTCTGATTCACTTTGAACAACACGAGGAAATTCACCCTGGAAAGCGTCACAAAGTGACTGATGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAGACTACTAGAAATGTACTGCAGGACTGACCAGCGCTGTATTTGCATGCTGTGCTTGATGAATGAACACAAAACCCATGAAACTGTGTTACCAGCTGAAGAGAGAGCAGAGAAACAGAAACATTTTAAAGAGACACTTAAGCCAAAAATGGAGGAGAGACAGGTGGGGTGTCAGATGCTGAGAGCTGCTGTAAAGTCTCACAAGGTGAGTTTTGAGCAGAAGATCACTTGCTGGAGGAGCTGTTTgagactaaggccccgtttacactaatgcgttttagtttgaaaacgcataagttttgctacggttacgccatccgtccacactacgccggagttctcgagcgccgaaaacggagcgtttcgaaaacgctggagaggccgttttcattctaaaacgctgcagctccgtctcagtgtgggtggggaaagacggagacatctgaaaacggaggcggggctgcagacattcgcctctctgattggggcttttcctcaatattaagtagcctaacacacagttcagtcctgaatcttctccgtgtaagttcagacttcgcaagtttgatcaaggctgcatctcttcttctcagtttgatatggaaaacataccgaggacacgcgtcaatcttcacagggaacagtgtactttataacttcattcacatcaccttggctacgttgtttcactttctcaacaataaaatgtaaacttgatataaggaactgcctatttttattttaatattaacaactaaacagacagcagaaatgttgaggcgtcgtgctgcatgagcgtcatcttcactgtctgcatatttataacaaaacggagccgataacaactgcctcctttcaatttcagtgaaaatacgaaacacaccctctcttttgctgaagttttaataatcgataatggccattataaaagtataacatacaataagtttatacattataggaaataaaggctagcgatcagtcaatatacagaatgtacgtgcttacattaatcattaacttatctttgcgctcagccaaaacacgttacctgagaacaagtaatagattccagtgaccaaagtcagggaatatgtcgttagataaagacaacaagatgaatgaaatatcccgtttaataaatatagtgagattagatccagcgggagatgcttgatgagaagtccgactagcagagctctcatctgggtagatgggctccagcgattgccaaagtgtgtgtgtgtggtcacgtgatgtgcgttttcagcgttttggtgtggacggagagcagttcagaaacgctgggtaaaacgcgagtgtggacgcggatcgttttcattctaaaacgccgttttaaaactaatacgcactagtgtaaacggggccactTAAGCCCCTGTGGGGAACAGGCTGTGTGAGGCAGTAAGAGCTGACTGATTCTGCTGCTTCTCTCTGTGTGTCCTAACAGCGCTCTGCACAGGCAGCAGTGGACAACACTGAGGCAATCTTTAATGAGCTCATCCAGTTAATAGAGAGAAACCGCTCAAAGGTGACACAAATGATCAGAGATCAGGAAAAGGCTGCAGTGACTGGAGTTGAAGGACAACTGAAGCGACTGGAGCAGGAGACTGATGATCTAAGGAGGAGAGACGCTGAGCTGGAGCAGCTTATATGCACAGACAACGACATCTACTTCCTCCAGGTAACACAGAACTGACAAACAGCACattgtgtttattaaggtgtctaattttttttaatgttcttcttgttttgttttttgtgtctaTGTAGAGTTTCCAGTCTCTTTCTGTTCCTCCTGGATCTACAAACTCATCCAGCATCAGTTCTCATGTCTCTTTTGGTGATTTGGTAACATCTGTTTCTCAGCTGAAAGAGAAACTGCAGCAGACTGTTAAAGAAGAGATGAAAAAGTTATTTCAAACAAGTAAATCATTGAAGCATTAATTCAGTGTCAGAAGTTTCAATATTATGAACATGATAAACAATGTAAGCCCAAAATACACtgtgtaaaatgtataaatataatcatGCAACACTGAAAATGTTTGTTGGTTTTCTTAGGGGAATGCATCAGTGTGATTCCCACCCCTGAATACCAGAACAGGAACAATGAGTTTCTACAGTGTAAGtacttttaatagttttttgtttgtttgattttaataaacaataaccTAGACATAAAAAGAAGATAACAACAAGCAGGTAGGCCTACTAAAATGGCAGGTCTGTTTATTAAAGGGCTTCAATTTTGGCCTTTGACAAGAtataaaataagtgttttatgTCTCTAGAAAAAACCTATCAGATCAATTATTATACCCtgcaaaaaattacattttgggcTCAGAGGAAATAAAATGAGCTGGTTCTTCCCGCCCACTGTTGGACCATTTGTTCAAAGTGAAAGATAACCAGGGTTGATGACCACAAATAAGTAATGAGAAGCACCTTTCGTTGCATTCCAAACAGTGTATATTGCCCACCAAAGGGCACTTTGGAAATGAAAAATCGTGGCGCCATATTGTCAAGTGTCATTTCTAACTGCACTTCAATTCAGAAGGCCTCGTCTCTGCTATAatccagggatgtcaaactcaattcctggaaggccgcagccctgcacagtttagttccaaccctgctccaacacacttaagctgtggtcacactacaGTTTAAGttagcaaaattctgtcatacggcgctgtgaaaaggggcgggattaaaaaagatgattagacattaaaaaaagcaagcgattggtccatatttaacatttctgtacagaaaggtcatgtttGGATCTTTGATtgttctcacgcagtcaagtgatgcgattccgcaggtcagagttcaccaagcttgaactttccaacgcagcgatctgcgaaacttgacgcatgaccttgagtttccggtctgatgcatatgcgtgcatatgaatggaagtcattggggagaaaagtccagtgtgaccgcagcttaccctgtatgtttcaaacaagcctgaaggactcaattagtttgatcaggtgtgtttaattagggttggaactaaactatgcagagctgcggccctccagaaattgagtttgacatccctgct
>TCONS_00031410
ATGGCAGAATCCAGTGTTTCTTTGGCTCAGGAGCATCAGTTTAACTGTTCAATCTGTGTGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCTTTAAGGAAAAACACCATGCTGGCTGAAGTGGTGGAGAATATCAGGAAGAGAAAACTACAAGCTGCTGGTCCTGCTCAGTGTTACTCTGAATCTGTAGATGTGGAGTGTGATGTTTGTACTGGGAGAAAATATAAAGCTGTGAAGTCTTGTCTGGTGTGTCTGGAATCTTACTGTCAGACTCACTTTGATTGTCATGAAGAATTTCACTCTAGAAAGCGACACAAAGTGACTGATGCCACTGGACGACTGCAGGAGATGATCTGCTCTAAACATGACAGACTGCTAGAAATGTACTGCAGAACTGACCAGTGCTGTATTTGCATGCTGTGCTTGATGAATGAACACAAAACCCATGAAACTGTGTTACCAGCTGAAGAGAGAGCAGAGAAACagAAACATTTTAAAGAGACACTTAAGCCAAAAATGGAGGAGAGACAGGTGGGGTGTCAGATGCTGAGAGCTGCTGTAAAGTCTCACAAGCGCTCTGCACAGGCAGCAGTGGACAACACTGAGGCAATCTTTAATGAGCTCATCCAGTTAATAGAGAGAAACCGCTCAAAGGTGACACAAATGATCAGAGATCAGGAAAAGGCTGCAGTGACTGGAGTTGAAGGACAACTGAAGCGACTGGAGCAGGAGACTGATGATCTAAGGAGGAGAGACGCTG
>TCONS_00031411
ATGGCAGAATCCAGTGTTTCTTTGGCTCAGGAGCATCAGTTTAACTGTTCAATCTGTGTGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGCTACTGGGATCAGGATGAGCAGAAGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCTTTAAGGAAAAACACCATGCTGGCTGAAGTGGAACAATGA

Function

symbol description
ftr04 Predicted to enable zinc ion binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093932 ENSDARG00000095345

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031401 False 807 mRNA 0.47 2 42260021 42261025
TCONS_00031402 False 874 mRNA 0.47 3 42260021 42261298
TCONS_00031403 False 240 mRNA 0.48 2 42260021 42261299
TCONS_00031404 False 3609 mRNA 0.42 2 42260021 42334707
TCONS_00031410 False 868 mRNA 0.46 3 42330828 42333229
TCONS_00031411 True 240 mRNA 0.48 2 42330828 42333711

Neighbor

gene id symbol gene type direction distance location
XLOC_015792 ftr06 coding upstream 9767 42247560 ~ 42250254 (+)
XLOC_015791 ftr02 coding upstream 17287 42236118 ~ 42242734 (+)
XLOC_015790 si:ch211-235o23.1 coding upstream 35318 42212948 ~ 42224703 (+)
XLOC_015789 ift57 coding upstream 49495 42200390 ~ 42210526 (+)
XLOC_015788 cavin4a coding upstream 61421 42191592 ~ 42198600 (+)
XLOC_015797 ftr10 coding downstream 9597 42344304 ~ 42345571 (+)
XLOC_015798 NA coding downstream 76181 42410888 ~ 42422644 (+)
XLOC_015799 BX005044.1 coding downstream 88977 42423684 ~ 42423799 (+)
XLOC_015800 BX294109.1 coding downstream 252031 42586738 ~ 42587035 (+)
XLOC_015801 march11 coding downstream 257865 42592572 ~ 42600113 (+)
XLOC_015783 NA non-coding upstream 246671 42013076 ~ 42013350 (+)
XLOC_015779 NA non-coding upstream 464452 41771111 ~ 41795569 (+)
XLOC_015778 NA non-coding upstream 676992 41578068 ~ 41583029 (+)
XLOC_015776 NA non-coding upstream 1011020 41230916 ~ 41249001 (+)
XLOC_015775 BX510333.1 non-coding upstream 1223830 41036076 ~ 41036191 (+)
XLOC_015802 NA non-coding downstream 282154 42616861 ~ 42624890 (+)
XLOC_015803 NA non-coding downstream 310681 42645388 ~ 42645994 (+)

Expression


Co-expression Network