XLOC_015801 (march11)


Basic Information

Item Value
gene id XLOC_015801
gene name march11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42592572 ~ 42600113 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031415
ATGGATGTGCACGCAGAGGCGGGTCCGTTGCACGTGCAGGCGGTGGATGAGCCACCGGGAGGCGCCACCGTGACCGTCACCGCCGCGCAGTTTCAGCCCCAAACTGTGCCGGGGAGCGACGGCGAGGATGTCCTGCAGGAACCGGGCGCTGGAGTTCAGACACCGTCACCGGCTGATCCTATCACGGAGATCGAGAGCGAGGATGGAGCGTGCGCAGGGACGGACACACTGCTGGAGGACAGCGGCGGACAGAGCGCGGTGAAAACGGAGACAGTGGGCTCCAGCTGCAGCAACGAGAGCTGTGTCCCGACACCTGGATGTCGGATCTGCTTTCAGGGAGCCGAGCAGGGGGAGCTGCTGAGCCCGTGTCGCTGTGCTGGCTCAGTTCGACATGCCCATCAGCAATGTCTGCTTAAGTGGATCAGTGAGAAAGGCTCCTGGAGCTGTGAACTCTGCAACTACAGATTCAACATTCTGCCTATACATATCAAACCACCACAACAGTGGCAGAGAGTCACCATGACTCTGGTGGAGAAGGTTCAGGTTATTGCGGTGTTTCTGGGTGGGCTCTTCCTACTGGCCAGTGTGTCCTGGTTGCTGTGGTCAGCACTGAGCCCGGAGGCATTATGGCAGCGCAGTGACATCCTGTTCCAAATCTGCTATGGCATGTATGCAGTCATGGACCTTGTGTGTATTGGTCTGATTGTTCATGAAGGCGGCGCTGTTTACAATGTGCTTTTACGATGGCGAGCTGTAAACCTCTTATGGGATGTCCAGAACTACGATAAAAGCAGAGACCTAGAGAACACACACAGCCCTCACCGCAACCTATGGTtacccctcacacacacacacacggtgtcGAACACACATACGCAAACCACCCGACTGGAGTCATCTCCTCGTTGCCCGCTCCACCTCTTTTCCATGTGCCTGAATGGGACCACCAACCTCTCGCCACAGGAGCAGGGCTCGGGCGAACTCGTTGTCAGAGTCACGTCAGTTTGA
>TCONS_00031416
GAGACAGTGGGCTCCAGCTGCAGCAACGAGAGCTGTGTCCCGACACCTGGATGTCGGATCTGCTTTCAGGGAGCCGAGCAGGGGGAGCTGCTGAGCCCGTGTCGCTGTGCTGGCTCAGTTCGACATGCCCATCAGCAATGTCTGCTTAAGTGGATCAGTGAGAAAGGCTCCTGGAGCTGTGAACTCTGCAACTACAGATTCAACATTCTGCCTATACATATCAAACCACCACAACAGTGGCAGAGAGTCACCATGACTCTGGTGGAGAAGGTTCAGGTTATTGCGGTGTTTCTGGGTGGGCTCTTCCTACTGGCCAGTGTGTCCTGGTTGCTGTGGTCAGCACTGAGCCCGGAGGCATTATGGCAGCGCAGTGACATCCTGTTCCAAATCTGCTATGGCATGTATGCAGTCATGGACCTTGTGTGTATTGGTCTGATTGTTCATGAAGGCGGCGCTGTTTACAATGTGCTTTTACGATGGCGAGCTGTAAACCTCTTATGGGATGTCCAGAACTACGATAAAAGCAGAGACCTAGAGAACACACACAGCCCTCACCGCAACCTATGGTtacccctcacacacacacacacggtgtcGAACACACATACGCAAACCACCCGACTGGAGTCATCTCCTCGTTGCCCGCTCCACCTCTTTTCCATGTGCCTGAATGGGACCACCAACCTCTCGCCACAGGAGCAGGGCTCGGGCGAAC

Function

symbol description
march11 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF11 (membrane associated ring-CH-type finger 11).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-276 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF11 (membrane associated ring-CH-type finger 11).

Ensembl:

ensembl_id ENSDARG00000075212

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031415 False 1008 mRNA 0.57 5 42592572 42600113
TCONS_00031416 True 715 mRNA 0.54 4 42592851 42600087

Neighbor

gene id symbol gene type direction distance location
XLOC_015800 BX294109.1 coding upstream 5537 42586738 ~ 42587035 (+)
XLOC_015799 BX005044.1 coding upstream 168773 42423684 ~ 42423799 (+)
XLOC_015798 NA coding upstream 169928 42410888 ~ 42422644 (+)
XLOC_015797 ftr10 coding upstream 247001 42344304 ~ 42345571 (+)
XLOC_015796 ftr08 coding upstream 271418 42318012 ~ 42321154 (+)
XLOC_015802 NA coding downstream 16748 42616861 ~ 42624890 (+)
XLOC_015803 NA coding downstream 45275 42645388 ~ 42645994 (+)
XLOC_015804 ftr11 coding downstream 108561 42708674 ~ 42713902 (+)
XLOC_015805 ftr12 coding downstream 115882 42715995 ~ 42722040 (+)
XLOC_015806 basp1 coding downstream 124291 42724404 ~ 42748657 (+)
XLOC_015783 NA non-coding upstream 579222 42013076 ~ 42013350 (+)
XLOC_015779 NA non-coding upstream 797003 41771111 ~ 41795569 (+)
XLOC_015807 BX005083.1 non-coding downstream 173236 42773349 ~ 42781254 (+)
XLOC_015809 NA non-coding downstream 372814 42972927 ~ 43010381 (+)
XLOC_015810 BX511268.1 non-coding downstream 398689 42998802 ~ 42998919 (+)

Expression


Co-expression Network