XLOC_015802



Basic Information


Item Value
gene id XLOC_015802
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42616861 ~ 42624890 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033640
ACTTGAGGTATTTGAGGATGCTTCTGGAGGCGGGGCTGAAGGTGCAGCACAGGCAGGCTATGATTCGCCAGCTGTTGATGTGGGCGGGGCCTCCAGGTTTGGGGTGGTGTGAGGTCTGCTTGATGAGCTGGCAAAAGAGCTCGTCTCTCAGAGGCCGCAGGTCGTGCGTCGTCTGCAGGAGTGTCTGGATGTGAGGGATGGCACTGACCTCTGTCTCCAGCTGATGGAGGACATTGAAGAGCTTCAGGGCTTCAGCCTGCAGGGTGCCATAACTTCTACCTTTGTCAGCTAAAAAGTGCACACGCAGGATGAAGAACGAACCAGCGGCGCCTCCAGTTGCggcgggacagtgtggaggagccTCCGCCCTTCTTCATCAGCCAGCCCTGTTTCAGAGCCTCCTGTCGGCTCCTGAACCACAGAAATGTCTCATCCTTCAGCACACACCAACGACGCTTCCATGAGTTCAACAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033640 True 473 lncRNA 0.57 2 42616861 42624890

Neighbor


gene id symbol gene type direction distance location
XLOC_015801 march11 coding upstream 16748 42592572 ~ 42600113 (+)
XLOC_015800 BX294109.1 coding upstream 29826 42586738 ~ 42587035 (+)
XLOC_015799 BX005044.1 coding upstream 193062 42423684 ~ 42423799 (+)
XLOC_015798 NA coding upstream 194217 42410888 ~ 42422644 (+)
XLOC_015797 ftr10 coding upstream 271290 42344304 ~ 42345571 (+)
XLOC_015803 NA coding downstream 20498 42645388 ~ 42645994 (+)
XLOC_015804 ftr11 coding downstream 83784 42708674 ~ 42713902 (+)
XLOC_015805 ftr12 coding downstream 91105 42715995 ~ 42722040 (+)
XLOC_015806 basp1 coding downstream 99514 42724404 ~ 42748657 (+)
XLOC_015807 BX005083.1 coding downstream 148459 42773349 ~ 42781254 (+)
XLOC_015783 NA non-coding upstream 603511 42013076 ~ 42013350 (+)
XLOC_015779 NA non-coding upstream 821292 41771111 ~ 41795569 (+)
XLOC_015809 NA non-coding downstream 348037 42972927 ~ 43010381 (+)
XLOC_015810 BX511268.1 non-coding downstream 373912 42998802 ~ 42998919 (+)
XLOC_015811 NA non-coding downstream 513665 43138555 ~ 43163518 (+)

Expression



Co-expression Network