XLOC_015821 (BX005060.1)


Basic Information

Item Value
gene id XLOC_015821
gene name BX005060.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 44373221 ~ 44386693 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031449
attaacagcgggaaagccatccacacgAAGGTTGTGGAGAGGCTGGCTGACCCTCATGCAGCTCCAGTAAAGTGCCCTGGCCAGAGTCAACACCACCAGCAACAACGCCGCAGCCCACGAGGCATAAATACCCCCGTACACCTGCGCCTGAGACCACGTTCctgcctgcaaacacacacatggaaACGTCACGCATTTCAGTTTTGAAATGACAAATGGTAACATATTACACATTTGAGCAAATGAATCAGTATGAATTtaggaaatcaaataaaatacaatttcagAAGGGTTACAtcccttgtttaaaaatataatttttaattttgggaAAAGGCTAATTTTAACTACCCTAGAGTTACAAAGTTAAGTTTTAGCATGAATCCCATGTTTGAATCCCTTCAAATGATCTATGGGTCAAGTTTtaatacttttagcttagcttagcatagatcaatgaatcagattagaccataagcatatccc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097327

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031449 True 486 lncRNA 0.41 2 44373221 44386693

Neighbor

gene id symbol gene type direction distance location
XLOC_015820 zgc:152670 coding upstream 10278 44348473 ~ 44362943 (+)
XLOC_015818 si:ch211-195h23.3 coding upstream 417811 43920461 ~ 43955410 (+)
XLOC_015819 NA coding upstream 437089 43935376 ~ 43936132 (+)
XLOC_015817 gbp3 coding upstream 454347 43894368 ~ 43918874 (+)
XLOC_015816 nlrb5 coding upstream 501834 43851983 ~ 43871387 (+)
XLOC_015823 NA coding downstream 8621 44395314 ~ 44400668 (+)
XLOC_015824 kcnab1b coding downstream 39916 44426609 ~ 44510752 (+)
XLOC_015825 pask coding downstream 125631 44512324 ~ 44545869 (+)
XLOC_015826 MTERF4 coding downstream 159219 44545912 ~ 44557318 (+)
XLOC_015827 BX323035.2 coding downstream 177685 44564378 ~ 44564494 (+)
XLOC_015814 NA non-coding upstream 713937 43653620 ~ 43659284 (+)
XLOC_015811 NA non-coding upstream 1209703 43138555 ~ 43163518 (+)
XLOC_015809 NA non-coding upstream 1362840 42972927 ~ 43010381 (+)
XLOC_015832 NA non-coding downstream 597790 44984483 ~ 44989293 (+)
XLOC_015843 NA non-coding downstream 1045889 45432582 ~ 45433628 (+)
XLOC_015846 NA non-coding downstream 1074440 45461133 ~ 45461974 (+)
XLOC_015810 BX511268.1 non-coding upstream 1374302 42998802 ~ 42998919 (+)

Expression


Co-expression Network