XLOC_015822


Basic Information

Item Value
gene id XLOC_015822
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 44383172 ~ 44385238 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033654
TGCTTTCACTGTTTTATAACTTCATCACCATTTTAATCATGTGTAATCTTAATCTCATGTAAACAAATTCAGAGGAGACCTCCATCATTGGCCTTCTGCTCTTTATAAATAACATCCCGACCTCCTGATTCTAGACGTCCAGACATGAAGTTTCTGACTTTGAGTCCAGATTTGcagttataattatatatttttaatgtattcatGTTCAGTTTATATCTCATAAGTCTGATTTTAGCAATTCAGACTTTAGCAATTCTGAGTTTAAAActttaatgcattattattgttattataactgAATCTTTTCTTTTCTTGAAACATGTTTCCATAGCATATTGATGAGTATATTGGTTGAAAATCTGCAATCTGAAGAAGAGAAACAAAGGTCTGGAAGTTTAGAATCTAAATCTAGTGGTTGATTAATCTCATTAGTATCATATCAGAGTTCAAACATAATCAAACGTACAGTACCTGAAAATGACGATTAACTTCACATGAGCATGAGAAGAGAGGTTAATGACCCTTTTGATAAAGTCCATGAAACACAGCTGAACCTTCATTGGAAAATAAAGATATGACTTCTTTATCTGCTTTCCCAAAGGCATTTGTAGCTGTTATCTCAAAATTACTTCCAGTCAAAACATTATCAGTAGTGATTTTGCTGGGAAAGCTTGTTTCTGCCAcagaataaacacattaatttatttacttattaaaagttgttgttttttcattaaATTGCAAGTAAAAGTtagaattctgagtttatatttcactccaaaattctgacatttttcaaCCTGAATTTAAATCTAGAAATTCTGACGTTTTATTctgaaattaaatctaaaaactgacatttttaaaTCTTAATTCTGAATTCAAATCTAGCAATTCTGGCAATTTTTTTATCTgaattcttaaattaaaatctaGAAATTCAGAAATGTTTAAAATCTGAATTCTGAATTAAATTCTAGAAATCTGACAGTTTTAATCAGAATTTTAATCAAGAAATTCAGACATTTTGTAATCTgaatttaaatctaaaaattcTGAAATGTTTTATTCCGAGTTGAAATCTAGAAATTCTGACATGTTTTACTCAGAATTTAAATCATGAAATTCTGGCGTTTTAATTCTAAATTAAAATCTAGAAATTCTgacatttttaaatcagaaatCTGACTTTAAATCTACCCATTCTGACTTTTTCCcaaaattttgaatttaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033654 True 1238 lncRNA 0.28 2 44383172 44385238

Neighbor

gene id symbol gene type direction distance location
XLOC_015820 zgc:152670 coding upstream 20229 44348473 ~ 44362943 (+)
XLOC_015818 si:ch211-195h23.3 coding upstream 427762 43920461 ~ 43955410 (+)
XLOC_015819 NA coding upstream 447040 43935376 ~ 43936132 (+)
XLOC_015817 gbp3 coding upstream 464298 43894368 ~ 43918874 (+)
XLOC_015816 nlrb5 coding upstream 511785 43851983 ~ 43871387 (+)
XLOC_015823 NA coding downstream 10076 44395314 ~ 44400668 (+)
XLOC_015824 kcnab1b coding downstream 41371 44426609 ~ 44510752 (+)
XLOC_015825 pask coding downstream 127086 44512324 ~ 44545869 (+)
XLOC_015826 MTERF4 coding downstream 160674 44545912 ~ 44557318 (+)
XLOC_015827 BX323035.2 coding downstream 179140 44564378 ~ 44564494 (+)
XLOC_015814 NA non-coding upstream 723888 43653620 ~ 43659284 (+)
XLOC_015811 NA non-coding upstream 1219654 43138555 ~ 43163518 (+)
XLOC_015809 NA non-coding upstream 1372791 42972927 ~ 43010381 (+)
XLOC_015832 NA non-coding downstream 599245 44984483 ~ 44989293 (+)
XLOC_015843 NA non-coding downstream 1047344 45432582 ~ 45433628 (+)
XLOC_015846 NA non-coding downstream 1075895 45461133 ~ 45461974 (+)

Expression


Co-expression Network