XLOC_015832


Basic Information

Item Value
gene id XLOC_015832
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 44984483 ~ 44989293 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033656
CTTGAGTGTAATCAAAGACTTATGTATGAACTTCATCTTTTAGGCTTTACTAGCAGTTCCTCACATGTTATTGGGGTTGTAGCAGAGCACATTGAGTTTGATATTTTCATCCCAGTGACGCAAAAGCAGGAAGAGCTGCCTGGCTGCTGCCCTCAAACCTGCCAAGTCGACACCCTCAGGTAGAGATTGACTCTTCAGCCAGAAATCTGCCTTGGCTGCCACTAGTTCCCACTCCACAAAAAATCCCGCACAGCGGTGCTCAAGCCAAGCCAGAGCCACCGCTGTGGCCCAGCTTGAGCTCTCTATGTCCATCTGGGCCTGTTCATACCTATGAGCTTCTGTGGGATCCAGTGGAGCACCTTCAAACATGTCAGTCTCAGAGCCCCGCCCACTGTCAGCCTGCGGAGCTCCACCCATCAATTTCGGAGACTCTTCTTCCAAGGGGTCAGACCATGAGTTATGCATGTGCCTCACGGAAGTGGAGGCAGGTGGTGAGGTACAACGAAAAGGTGGGCTCAGACTGCTGCGGTGGCTCAGGTATGGGGATGCTCGTTTTAGGCGGTCCAGTGGAATCTGGATGCACTCAGAATATGATTCGGACAGCAGAAATGCACCTGATGCAAGCTGCAGACGCACCTGTCAGGAAACAAATCTCTGATGACAGATCGTGCGGTCAGCTGGTGAATAATCTCATCCCAGGACCCAGTGCTGGTTGGCAGGATTGCTGAGCTCTCGGTGTCCCATAAAACAGACAGATCCACACTGACTTCCCAGGATACAGACCTTCCTCCGAGCATGCCATGGATGACTGAGCGACACTGAGCCCCTGAAGCCTGGGCCTCGCCTGGAGGAGCAGCCAAAAAAAGGCCTTCAGGATCGGTGAATGTGTCCCAGTCTAGTGGGGAAGCAGGAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033656 True 915 lncRNA 0.53 2 44984483 44989293

Neighbor

gene id symbol gene type direction distance location
XLOC_015831 alg3 coding upstream 3139 44972720 ~ 44981344 (+)
XLOC_015830 ece2a coding upstream 58193 44781185 ~ 44926290 (+)
XLOC_015829 yeats2 coding upstream 291168 44615000 ~ 44693315 (+)
XLOC_015828 klhl24a coding upstream 380028 44571200 ~ 44604455 (+)
XLOC_015827 BX323035.2 coding upstream 419989 44564378 ~ 44564494 (+)
XLOC_015833 prss56 coding downstream 59997 45049290 ~ 45058240 (+)
XLOC_015834 si:dkey-76d14.2 coding downstream 79073 45068366 ~ 45070442 (+)
XLOC_015835 chrng coding downstream 92196 45081489 ~ 45097743 (+)
XLOC_015836 CU929150.2 coding downstream 111670 45100963 ~ 45113236 (+)
XLOC_015837 CU929150.1 coding downstream 170562 45159855 ~ 45162467 (+)
XLOC_015823 NA non-coding upstream 583815 44395314 ~ 44400668 (+)
XLOC_015821 BX005060.1 non-coding upstream 597790 44373221 ~ 44386693 (+)
XLOC_015822 NA non-coding upstream 599245 44383172 ~ 44385238 (+)
XLOC_015819 NA non-coding upstream 1048351 43935376 ~ 43936132 (+)
XLOC_015843 NA non-coding downstream 443289 45432582 ~ 45433628 (+)
XLOC_015846 NA non-coding downstream 471840 45461133 ~ 45461974 (+)
XLOC_015847 NA non-coding downstream 478774 45468067 ~ 45468585 (+)
XLOC_015862 NA non-coding downstream 1067513 46056806 ~ 46060001 (+)
XLOC_015863 NA non-coding downstream 1205034 46194327 ~ 46332513 (+)

Expression


Co-expression Network