XLOC_015845 (si:ch211-66k16.2)


Basic Information

Item Value
gene id XLOC_015845
gene name si:ch211-66k16.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45454415 ~ 45456892 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031487
GTTTTCCTTTTAATTATGATCTTTAATTGTTTGTGAATTGagaacacaactttttttttaattttcagtgtCCGTTTGTAACTGACTGAGTAGCAAAgattaaaattgtatttcttGATGCAGCTGCAGACTGTGTTCTGTGATAGTGGTTTTCAAACGCACTTCTCGGTGCTGTGGATTTATTCAGCACCACAGCTTGACATTTTGGTTCCATCTTGGTTTAGAGGTTGAGAACATTAAGGTGAGGTTTCCTGTCTTGCTGAttcttatatactgtatatggtgGTGTGCCTCTGTCTGAACTTGTTAGAATGTGTTGCATCCATCAGAATCTacgtttttacattttcaaatggtgtatatatatataaataatcacaatatatgttaaatgtattattaacaaaCTTTTGTCTTTGTCTCTCTCTTTAATAGACATTGATTCTGGCGAGGAATTTAAAGGGAACATGATGCGTCAGTACAAGTCTTCCATTATTGAAAGTTGCATGTTTGTGACTGAGTACAAACTTCCATCTGATAAACCTGTGAGTCTGGCCACCCGTTACACTGAACCAGTGATCATTCAGAGGAGTAAAATGCAGACAGAGAAATACTGTCAAGAATATGTGAAGTCTGCGCACACTTCTGGAACAAAAACAGCATCTAAACTGTTATCAAATGACAAGAATCAGAGCATCAGAATCAACCAGTTCTTCAGTCATGACAGTAATAGAAACACACCGAAAACTGTGATTCTCAGTGGAGATTCTGGAAGAGGAAAATCCTTCATCTTACAGAAGATCATGCTAGACTGGGCATCTGAAGAACTTTACAATAAAAACTTTGATATAGTTTTCCTATTGAAGTGGGAAGAGCTGAAGTGTCTTTCTAAGGAGATGAGCTTGACTGAGCTCTTGAGCAGGAGCTGTAGCTTAACATCTGATCAGATCTCTGAGATCCTAAAATTAACACCAGAGAAAGTTCTGTTCCTCATTGATGGAGTGGATGAGTTTGAATCTCATCCATTCACTAAGTTCACGTTATCACACATTGATCCATCCAAAAGAGCTCCACCTTCCGTTATTCTCAGGAACCTGTTTGAGGGAATCTTGCTGCCTCGGTCATTCAGGCTCGTCACCTCAAAATGTATAGCTGCTGATGTAGTGATGATGAATCTCCTGAAAGGACCTTTGCGTTTCACAGAGATTGAGGGTTTCTCTGAGAGAGGGGTGCAGGAGTATTTCCAGAAGTTCTTTCAGGATGAGAAACTCTTCAAGAAAGCATACGAGAGCGTGAAGACCAATAAAACCCTACTGACCACCTGCTCTGTGCCTTTGCTGTGCTGGATGGTCTGTTTTTGCCTGAAGAAAGATGCTGATCAGGTGATGACAGAACTAAAGACCACCACATCCATATATGTGCACTTTGTGTCGACTCTGCTGCAGGATCATCACCAGTGTCAGTCAATGCTCAGGAGTCAGGCTCAGCTGGCAGAGAAGAACAGAGAAGTATTGATAATACAGCATGTCAGCTTTCAGAAGTTCTTCACAGCTCTTGATTTCTACCTTGATAAAAAAGATCACTGTTGGAAAACAACTGACAGCTTGTCTACAGACAAAATCTCATATTTAATGTCTTCATCTCATCTGCTGTTTGCCTGTGGTCTCTTAAATATTAAAGTGGACagccattttttaaaaaggtgtgaCTGGAAAGTCGTAGACGAGATCAATCTGAAAATGGAACTGCTGGAAATAATTTGGGCAATGTCAAAGCAATATAGAGTTAAGTTGTTTGCTCTGCACTGTCTGTATGAGCTCCAGGATGATGAGTATACAAGAAAAGCTTTAGCAAGTTGGGTATCAGTGGATCTGTCTAATGTTTTTCTAAAGAGCACAGACTGTTTGGCGCTGCGTTACTGTCTTCAGTTGTGTCCAAACATCAGATACCTAAAGCTCATGTACTGTGATTTAACAGCTGCTAAACTCAAGATTCTTCAGCCGGCACTCGCCCTGTGTGAGACTCTGAGGTCAGTGTCTACTTGTAATGTAATAATTTGAGTCACTTAAAGAAACTTCGGTCACAGCACCAAACTCTGGAGTAATGTGGTGATATATATTTGATTGATTGAGGTGACGACAATAACACATTGCCTGCTTGTTGGCTGAGGGGTGTTGTGCATCATGTGTGttgtacatataataaataattgtctGATTTATCTCAGATGCAGCAGCTCGAAACGAAAGATTT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-303 No description available

Ensembl:

ensembl_id ENSDARG00000095634

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031487 True 2253 mRNA 0.40 2 45454415 45456892

Neighbor

gene id symbol gene type direction distance location
XLOC_015844 si:ch211-66k16.27 coding upstream 6124 45441007 ~ 45448291 (+)
XLOC_015843 NA coding upstream 20787 45432582 ~ 45433628 (+)
XLOC_015842 wdr47a coding upstream 34729 45382433 ~ 45419686 (+)
XLOC_015841 camsap2b coding upstream 78007 45354747 ~ 45376408 (+)
XLOC_015840 camsap2b coding upstream 100954 45344070 ~ 45353461 (+)
XLOC_015846 NA coding downstream 4241 45461133 ~ 45461974 (+)
XLOC_015847 NA coding downstream 11175 45468067 ~ 45468585 (+)
XLOC_015848 si:ch211-66k16.28 coding downstream 22949 45479841 ~ 45550327 (+)
XLOC_015849 aknad1 coding downstream 54567 45511459 ~ 45515448 (+)
XLOC_015850 aknad1 coding downstream 64991 45521883 ~ 45522870 (+)
XLOC_015832 NA non-coding upstream 465122 44984483 ~ 44989293 (+)
XLOC_015827 BX323035.2 non-coding upstream 889921 44564378 ~ 44564494 (+)
XLOC_015823 NA non-coding upstream 1053747 44395314 ~ 44400668 (+)
XLOC_015822 NA non-coding upstream 1069177 44383172 ~ 44385238 (+)
XLOC_015862 NA non-coding downstream 599914 46056806 ~ 46060001 (+)
XLOC_015863 NA non-coding downstream 737435 46194327 ~ 46332513 (+)
XLOC_015864 NA non-coding downstream 823810 46280702 ~ 46317783 (+)

Expression


Co-expression Network