XLOC_015847


Basic Information

Item Value
gene id XLOC_015847
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45468067 ~ 45468585 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033298
CACGCGCAGAAGGCGTGACCACGCAACTATGAACTTTTTCCTTATGACGCACTGGTTTCGTTTTCAAAAGCGGGAATCACTGAGCTGTTTTGGTCGTTAAAACAGAATAATGTTTTGCCATTTTAGTCAGTGTTAGATCTAGTTAAAAGTCAGTAACTAGTATATCAGCAAATCGATAATTCAGTATCAAGGATTGTTTATGTGACACACGATGTCTAGTGATTACACAGACCGAAATAACTTAGCTTCCGCAATTAAGACATTAGGAGATATGCTAGAAAAGGATGAAGCATTTCAGAGGTTAATGTATAATGCGAGCACAAAGGGAGAAATCAACCGGGGCAGAGTGAATAAAGTGTTCCTTAAAGCACTACTGTCAGCAGGAGACAAAGTAGGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033298 True 398 lncRNA 0.40 2 45468067 45468585

Neighbor

gene id symbol gene type direction distance location
XLOC_015846 NA coding upstream 6093 45461133 ~ 45461974 (+)
XLOC_015845 si:ch211-66k16.2 coding upstream 11175 45454415 ~ 45456892 (+)
XLOC_015844 si:ch211-66k16.27 coding upstream 19776 45441007 ~ 45448291 (+)
XLOC_015843 NA coding upstream 34439 45432582 ~ 45433628 (+)
XLOC_015842 wdr47a coding upstream 48381 45382433 ~ 45419686 (+)
XLOC_015848 si:ch211-66k16.28 coding downstream 11256 45479841 ~ 45550327 (+)
XLOC_015849 aknad1 coding downstream 42874 45511459 ~ 45515448 (+)
XLOC_015850 aknad1 coding downstream 53298 45521883 ~ 45522870 (+)
XLOC_015851 aknad1 coding downstream 63852 45532437 ~ 45537935 (+)
XLOC_015852 fndc7a coding downstream 80305 45548890 ~ 45567702 (+)
XLOC_015832 NA non-coding upstream 478774 44984483 ~ 44989293 (+)
XLOC_015827 BX323035.2 non-coding upstream 903573 44564378 ~ 44564494 (+)
XLOC_015823 NA non-coding upstream 1067399 44395314 ~ 44400668 (+)
XLOC_015862 NA non-coding downstream 588221 46056806 ~ 46060001 (+)
XLOC_015863 NA non-coding downstream 725742 46194327 ~ 46332513 (+)
XLOC_015864 NA non-coding downstream 812117 46280702 ~ 46317783 (+)
XLOC_015865 CR356240.1 non-coding downstream 820275 46288860 ~ 46288996 (+)
XLOC_015868 NA non-coding downstream 1298978 46767563 ~ 46814415 (+)

Expression


Co-expression Network