XLOC_015849 (aknad1)


Basic Information

Item Value
gene id XLOC_015849
gene name aknad1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45511459 ~ 45515448 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031490
ATTCAACAGGAGAAGCAGAGGACATGGACGGTGAAGATGAAGCTCACAGCAGACCTTCATCAGTGCTGTGGGAAAGACACATCGAGCAGAGTATATTTGTGGATATAAGCGATGATGACAGCCTGCACTTCAGTGATATGGAGGGCGCCTTCAATGTCCAGCTCTTACAGGGCTCTGGTGTACCTGAGAGCCCTCAACTCACTGATGATGCAGAGCAGTCAGAGTCATGTGAAACCGAAGAGGGATCCTCAGAGACTCTCGAATCAGTCAGTAGTGAACACACAGAGCATTCAAACCCTGGAAAGAGGAGGGGAAATATAACCAAAGCACCAATGCAGAAACTCAGCACTACAGTAAAGCCAGTCATTGCAACACATGAGGATGATGCTGTCAACACTAGTGATGAAGAACATGAAGATCTCCCATATGATGGTGCACACAAAACTGAGATGAATTTAAAATCAACTCCATGTGAAACGGTTACACCAAGGCAAACACTTGATAAGTTTAATATGCAAATCGGTCATGCAGAAGAAACAGTGGCTTGCCAATCTAATCTTACTCACGCTCTTCCATCCAATCATAAAACAGCAGACTGTTTGGCTCCTCCTGTTACCACGC

Function

symbol description
aknad1 Orthologous to human AKNAD1 (AKNA domain containing 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-649 Orthologous to human AKNAD1 (AKNA domain containing 1).

Ensembl:

ensembl_id ENSDARG00000094414

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031490 True 621 mRNA 0.45 2 45511459 45515448

Neighbor

gene id symbol gene type direction distance location
XLOC_015847 NA coding upstream 42874 45468067 ~ 45468585 (+)
XLOC_015846 NA coding upstream 49485 45461133 ~ 45461974 (+)
XLOC_015845 si:ch211-66k16.2 coding upstream 54567 45454415 ~ 45456892 (+)
XLOC_015844 si:ch211-66k16.27 coding upstream 63168 45441007 ~ 45448291 (+)
XLOC_015843 NA coding upstream 77831 45432582 ~ 45433628 (+)
XLOC_015850 aknad1 coding downstream 6435 45521883 ~ 45522870 (+)
XLOC_015851 aknad1 coding downstream 16989 45532437 ~ 45537935 (+)
XLOC_015852 fndc7a coding downstream 33442 45548890 ~ 45567702 (+)
XLOC_015853 fndc7a coding downstream 49765 45565213 ~ 45565811 (+)
XLOC_015854 fndc7rs2 coding downstream 78335 45593783 ~ 45598651 (+)
XLOC_015832 NA non-coding upstream 522166 44984483 ~ 44989293 (+)
XLOC_015827 BX323035.2 non-coding upstream 946965 44564378 ~ 44564494 (+)
XLOC_015862 NA non-coding downstream 541358 46056806 ~ 46060001 (+)
XLOC_015863 NA non-coding downstream 678879 46194327 ~ 46332513 (+)
XLOC_015864 NA non-coding downstream 765254 46280702 ~ 46317783 (+)
XLOC_015865 CR356240.1 non-coding downstream 773412 46288860 ~ 46288996 (+)
XLOC_015868 NA non-coding downstream 1252115 46767563 ~ 46814415 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000152_02349963_02354320 NA coding CI01000152 null 2349869 ~ 2354320 (+)