XLOC_015855 (fndc7rs1)


Basic Information

Item Value
gene id XLOC_015855
gene name fndc7rs1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45619949 ~ 45626763 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031497
ATTGTGTCATGGCAATACGGTGAAGGAGCTCAAGGGTATGCCGTCTCTGCCTTGTCCCTGCTAGGCAACAGGACCGGCTGTATGTCCAACAGCTCCAGTACATACTGTGAGCTGAGCAACCTACAGTGTGGCACTGAGTATATGGTGACTGTTCAGACTTTGGGTAACACGTGCAATGCCAGCGCACAGATGAACAGCTCCCTGATTATAGGTACATGTGTTCCTCAACATCTGACAGTCCAGTACAGTCCATCCAACACTCGGATTTCCTGGGATGCCTCTAACGGTGCAGCCGGCTTCACCGCAGTGGCTGTGACTCCTGAAGGCCTAAGAGTAAACTGTGAGAGCAACACCAGCTGTATCCTCCCAGTACTGAACTGTGGTCACATCTACAACTTCAGCGTGACGGCTCACAACGGAGTCTGCAACAGCACTGCCATCACTGATCCTATCAAGACAGAGCCCTGTCCTCCTCAGAACGTCAAAGCTAGCA

Function

symbol description
fndc7rs1 Is expressed in posterior lateral line neuromast.

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-652 Is expressed in posterior lateral line neuromast.

Ensembl:

ensembl_id ENSDARG00000092469

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031497 True 493 mRNA 0.52 3 45619949 45626763

Neighbor

gene id symbol gene type direction distance location
XLOC_015854 fndc7rs2 coding upstream 21298 45593783 ~ 45598651 (+)
XLOC_015852 fndc7a coding upstream 52247 45548890 ~ 45567702 (+)
XLOC_015853 fndc7a coding upstream 54138 45565213 ~ 45565811 (+)
XLOC_015848 si:ch211-66k16.28 coding upstream 69622 45479841 ~ 45550327 (+)
XLOC_015856 fndc7rs3 coding downstream 9271 45636034 ~ 45639159 (+)
XLOC_015857 fndc7rs4 coding downstream 16359 45643122 ~ 45652375 (+)
XLOC_015858 gpc5c coding downstream 69980 45696743 ~ 45806367 (+)
XLOC_015859 si:ch211-170p16.1 coding downstream 292176 45918939 ~ 45921203 (+)
XLOC_015860 CR762395.1 coding downstream 382744 46009507 ~ 46012744 (+)
XLOC_015847 NA non-coding upstream 151364 45468067 ~ 45468585 (+)
XLOC_015846 NA non-coding upstream 157975 45461133 ~ 45461974 (+)
XLOC_015843 NA non-coding upstream 186321 45432582 ~ 45433628 (+)
XLOC_015832 NA non-coding upstream 630656 44984483 ~ 44989293 (+)
XLOC_015827 BX323035.2 non-coding upstream 1055455 44564378 ~ 44564494 (+)
XLOC_015862 NA non-coding downstream 430043 46056806 ~ 46060001 (+)
XLOC_015863 NA non-coding downstream 567564 46194327 ~ 46332513 (+)
XLOC_015864 NA non-coding downstream 653939 46280702 ~ 46317783 (+)
XLOC_015865 CR356240.1 non-coding downstream 662097 46288860 ~ 46288996 (+)
XLOC_015868 NA non-coding downstream 1140800 46767563 ~ 46814415 (+)

Expression


Co-expression Network