XLOC_015859 (si:ch211-170p16.1)


Basic Information

Item Value
gene id XLOC_015859
gene name si:ch211-170p16.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45918939 ~ 45921203 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031502
GGTGGCAACAAAGGATTAAATATAAAATGGGAAATTATCGAGCCAAATTAAGAGGTAGCCAGCTTTCTTGCCCAGAGCTTGAGGTGAACCAGAAAAGGAAGACAAATGAAAACCCTACTCCAAAAGGCTTCAAAAGACCTAGGAAGGCTGAAGTAAATTACTTGCCACCATTTCCATTTGGGGAAACAGGAGAAAGTTTGGAGAAGGAGAGACTAGATCTCCTTAATGAAATTAggaagaaaaacaacaaaaacatcattGGCGAGAAAATGGAGAAGACTTTCTCCTATCGAAGAACAGAAGTAGTTAAGGACTGCCCTGCTGTTAAAGATTTCATGGAGAGATGGCCAGCCCTTTTCTGTGAATCTGAGatCAAGAATGAATTTAGAAGAATCACCACAATTTCCTTGGAGCGTACATTCTTGGAAAAGCTGGACTTCTATACTCCAAAACTCCTGGCTTTGTTTGAGATGAAGGGTGGGGTTGCTGGCATAAGAATTAGACATTTGCTGGATTCACTCAGCCagCAAGAAGATAGGCTTGAAGATAGGCGAGACGTTGTGATTCGCTGCCTCCTGTCTTTCCTTGGAGAATCAGCTGAGGAGCTCATTGAAGACCACCAGGATGTCAGCAGAGACATGATTAAGGATACCTTCGCCAGTCATGTCATGAAAATCATCGTCCTGAGCAGATCTGTAGAAGAGGAAGATGCCAGTAGATCTGATGTCATCATTGTCATCGAGGGAACTGAGGTGCTGCTGGGATGTAAAAATCTCACAAATGCATGTCTTTCACTCATGGGCTGCATTTACTCCCTAAACCTAAGCTATCCCCCAAAGCTGAGAAACACATTTGAAGTGTTTCAGAAAATCTTTCTTGGCCTAGATGCTTTAAAATTCTCTCCAAAGGTTAACTCTTTGCATAGAAAGCTTCTAATGTAATCTGCTAGTTGAGCACTACTTGCACTTATTTACACTACTTATgctgttttactgttttttttttgtttttttttgcatgaaaggTTGTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091590

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031502 True 1031 mRNA 0.41 4 45918939 45921203

Neighbor

gene id symbol gene type direction distance location
XLOC_015858 gpc5c coding upstream 112572 45696743 ~ 45806367 (+)
XLOC_015857 fndc7rs4 coding upstream 266564 45643122 ~ 45652375 (+)
XLOC_015856 fndc7rs3 coding upstream 279780 45636034 ~ 45639159 (+)
XLOC_015855 fndc7rs1 coding upstream 292176 45619949 ~ 45626763 (+)
XLOC_015854 fndc7rs2 coding upstream 320288 45593783 ~ 45598651 (+)
XLOC_015860 CR762395.1 coding downstream 88304 46009507 ~ 46012744 (+)
XLOC_015861 gpc1b coding downstream 111475 46032678 ~ 46184590 (+)
XLOC_015862 NA coding downstream 135603 46056806 ~ 46060001 (+)
XLOC_015863 NA coding downstream 273124 46194327 ~ 46332513 (+)
XLOC_015864 NA coding downstream 359499 46280702 ~ 46317783 (+)
XLOC_015847 NA non-coding upstream 450354 45468067 ~ 45468585 (+)
XLOC_015846 NA non-coding upstream 456965 45461133 ~ 45461974 (+)
XLOC_015843 NA non-coding upstream 485311 45432582 ~ 45433628 (+)
XLOC_015832 NA non-coding upstream 929646 44984483 ~ 44989293 (+)
XLOC_015827 BX323035.2 non-coding upstream 1354445 44564378 ~ 44564494 (+)
XLOC_015865 CR356240.1 non-coding downstream 367657 46288860 ~ 46288996 (+)
XLOC_015868 NA non-coding downstream 846360 46767563 ~ 46814415 (+)

Expression


Co-expression Network