XLOC_015864


Basic Information

Item Value
gene id XLOC_015864
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 46280702 ~ 46317783 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033661
GCGGTTTTCGGTTTGCGGTCTCTGATTGGTCGGTAGGTTTTAAAGGGGGTTTCGGGGGGGTCTGCTTCTCCCGAGCTCTCTCTTCTGTGCGCTCGGCGGCCGTGGCAGCAtcctctcactcactcactctgtACTACTGCCTGCGATGTGACTCCACGCAGCGCGCTTTGCTGGAATAATCACCCCGCGGGACTGACAACTGACGGATTTTACGCGCACGCCACGCCGTCCGGTTTTCCAAAATCAACGGGACACCGCGGCTGCGGCCAATGCCTTTTACCATGACTGTGGGATTAATAACGATTTTGTCCGCTGTTACAGCCGTTTACGCGATGGAAGTCCAACTGCAGCAAAGCGAGGCTTTATTCCAAACGATTGCAggctgtaaacatttta
>TCONS_00033662
ctctgtACTACTGCCTGCGATGTGACTCCACGCAGCGCGCTTTGCTGGAATAATCACCCCGCGGGACTGACAACTGACGGATTTTACGCGCACGCCACGCCGTCCGGTTTTCCAAAATCAACGGGACACCGCGGCTGCGGCCAATGCCTTTTACCATGACTGTGGGATTAATAACGATTTTGTCCGCTGTTACAGCCGTTTACGCGATGGAAGCTAGTGAATCTGCTTTGGCGAA

Function

GO:

id name namespace
GO:0007005 mitochondrion organization biological_process
GO:0090148 membrane fission biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0019867 outer membrane cellular_component
GO:0031968 organelle outer membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033661 False 396 lncRNA 0.55 2 46280702 46317783
TCONS_00033662 True 235 lncRNA 0.54 2 46280828 46312806

Neighbor

gene id symbol gene type direction distance location
XLOC_015861 gpc1b coding upstream 96112 46032678 ~ 46184590 (+)
XLOC_015862 NA coding upstream 220701 46056806 ~ 46060001 (+)
XLOC_015860 CR762395.1 coding upstream 267958 46009507 ~ 46012744 (+)
XLOC_015859 si:ch211-170p16.1 coding upstream 359499 45918939 ~ 45921203 (+)
XLOC_015858 gpc5c coding upstream 474335 45696743 ~ 45806367 (+)
XLOC_015866 FQ377603.1 coding downstream 93296 46411079 ~ 46489869 (+)
XLOC_015867 ephb1 coding downstream 272015 46589798 ~ 46728027 (+)
XLOC_015868 NA coding downstream 449780 46767563 ~ 46814415 (+)
XLOC_015869 NA coding downstream 512451 46830234 ~ 46843007 (+)
XLOC_015870 NA coding downstream 529080 46846863 ~ 46882199 (+)
XLOC_015847 NA non-coding upstream 812117 45468067 ~ 45468585 (+)
XLOC_015846 NA non-coding upstream 818728 45461133 ~ 45461974 (+)
XLOC_015843 NA non-coding upstream 847074 45432582 ~ 45433628 (+)
XLOC_015832 NA non-coding upstream 1291409 44984483 ~ 44989293 (+)
XLOC_015871 NA non-coding downstream 585425 46903208 ~ 46927052 (+)
XLOC_015872 NA non-coding downstream 625314 46943097 ~ 47099564 (+)

Expression


Co-expression Network