XLOC_015869


Basic Information

Item Value
gene id XLOC_015869
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 46830234 ~ 46843007 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033665
AGTCGTTACTTTGATGCACTTGAACCCCGttatcatggtcaactcctctctgcatctcaagtccactgacgaaCCACTTGGCAAAGTGATAACAACAGGAAAGCTGTCCAtagggagGCTCTGCCGGATGACTGGAGTATGGCCAGCCTCCTTCTCTCAGAAAGCAAGCAGAGAGGATGATATGGAGAATCTCACGAGAGACAAAGAGTGAGTCGGTGGCTGCTGGTGTACATTTACTGAAGCCAGGCTGGTCAGAGAGCATTCTCAACAGAGATGCAGGTCAAACTCATTTGCAGGGCTCTATGAGAGGCTAGCTGAAGCACACAGCGGTTCTGC
>TCONS_00033301
gttgttcacAAAACCAAAAACCATTTAGTGCCAATTATTCAAGGTAACACGAGATGAAAAAGATCAGAGGAAAAGATTCTCACCAGAACAAATATGACtaggggaagaaaaaaaataaaaacgtgcGGATTTAGCGTGGAAGACTCTGCTCAGGATCAAAGGTGCTTGTGGCTGCGCTAATGCCGTCAGCTTCCATTTCCTCTGGAGTCTTGCTACGCTGGATTAGCTggccatttttctttttttcatgtgTGAGAGAGAACAGCACCTCCCTACAGCCCTTGCGGATTACCAGAACCCCTGCTGCTCCTCCAACATGCCGTTCAGTCTCATCCAGAGCCGCCGTTTCTGATTTCCcatccctccgtcagtatgactGGAAGCTAAAAGCAAGCATGTCCTGTATTAGCCAATGCGGCACTCAAGTATGTTTTGGATTAAATGCCGCAGTTTACACAGCTCTGCCGGATGACTGGAGTATGGCCAGCCTCCTTCTCTCAGAAAGCAAGCAGAGAGGATGATATGGAGAATCTCACGAGAGACAAAGAGTGAGTCGGTGGCTGCTGGTGTACATTTACTGAAGCCAGGCTGGTCAGAGAGCATTCTCAACAGAGATGCAGGTCAAACTCATTTGCAGGGCTCTATGAGAGGCTAGCTGAAGCACACAGCGGTTCTGCTGGATGGATCATTCAAGCATCATTCACCATTACAGTATGTACTAAGAACATTTTGTTAACATATTAAGTTACACAAATGGTATAATCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033665 False 336 lncRNA 0.50 2 46830234 46842919
TCONS_00033301 True 765 lncRNA 0.45 2 46837023 46843007

Neighbor

gene id symbol gene type direction distance location
XLOC_015868 NA coding upstream 15819 46767563 ~ 46814415 (+)
XLOC_015867 ephb1 coding upstream 102207 46589798 ~ 46728027 (+)
XLOC_015866 FQ377603.1 coding upstream 340365 46411079 ~ 46489869 (+)
XLOC_015863 NA coding upstream 497721 46194327 ~ 46332513 (+)
XLOC_015870 NA coding downstream 3856 46846863 ~ 46882199 (+)
XLOC_015871 NA coding downstream 60201 46903208 ~ 46927052 (+)
XLOC_015872 NA coding downstream 100090 46943097 ~ 47099564 (+)
XLOC_015873 BX248512.1 coding downstream 269689 47112696 ~ 47113654 (+)
XLOC_015874 BX248512.2 coding downstream 305926 47148933 ~ 47149569 (+)
XLOC_015864 NA non-coding upstream 512451 46280702 ~ 46317783 (+)
XLOC_015865 CR356240.1 non-coding upstream 541238 46288860 ~ 46288996 (+)
XLOC_015862 NA non-coding upstream 770233 46056806 ~ 46060001 (+)

Expression


Co-expression Network