XLOC_015886 (ftr19)


Basic Information

Item Value
gene id XLOC_015886
gene name ftr19
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47944967 ~ 47951567 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031533
AGGGGGGAAAAACATTCCGAGGAGTCGCCTTTGGCTTTATATGTTTGCAAACGTCTGATTTTAGTTTCTCATACTTTCCCTTGAAACTATTGGTCtcgtttaaaaaagaaaacaagcggTTTCTTAAAGAAATCCCGTCGAAACATTTTAGTCAGGTTGTTGCCTTCCAAGTTGTTTGTAGGCTGCAGCGTTGTGCAGGCCCACGATCAACGTGTGTTTTATCAGCCAGCAGAGTTGACGAACTTTTTAAAGTAATCTCAGTGAACGGAGAAGCTGTCTACTGTTCTATTTCTGCAGAGCAATGGCAGAAGCCAGCATTTCTGTTGCTCAAGATCAGTTCAGCTGTTCAATCTGTCTGGATCTCCTGAAGGACCCAGTGACCATCCCCTGTGGCCACAGTTATTGTATGAACTGCATTACTGAATACTGGAATCGACGTGATCTGTCGATTAATAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAAACCTGCCTTAAACAAGAATGTGATGTTGGCAGAAATGGTGGAGAAAGTGAAGGCGATAAAAGTCCAAACAGTTGACCCTGCTCCCAGTTACGCTGGACCTGGAGATGTGGAGTGTGATGTTTGTAATGGGAGAAAACGCAAAGCTGTTAAATCCTGCCTAGTGTGTCTCGAATCTTACTGTCAGTGCCATTATGAGTCTCACGAAGAATCTCGTTCAAAGAAGCGACATAAGATAACTGATGCCACTAGACGAATCCAGGATATAATCTGCTCCAAACACGACCGACTGCTGGAGGTTTACTGTCATTCTGATAAGCAATGTata
>TCONS_00031534
AGCAATGGCAGAAGCCAGCATTTCTGTTGCTCAAGATCAGTTCAGCTGTTCAATCTGTCTGGATCTCCTGAAGGACCCAGTGACCATCCCCTGTGGCCACAGTTATTGTATGAACTGCATTACTGAATACTGGAATCGACGTGATCTGTCGATTAATAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAAACCTGCCTTAAACAAGAATGTGATGTTGGCAGAAATGGTGGAGAAAGTGAAGGCGATAAAAGTCCAAACAGTTGACCCTGCTCCCAGTTACGCTGGACCTGGAGATGTGGAGTGTGATGTTTGTAATGGGAGAAAACGCAAAGCTGTTAAATCCTGCCTAGTGTGTCTCGAATCTTACTGTCAGTGCCATTATGAGTCTCACGAAGAATCTCGTTCAAAGAAGCGACATAAGATAACTGATGCCACTAGACGAATCCAGGATATAATCTGCTCCAAACACGACCGACTGCTGGAGGTTTACTGTCATTCTGATAAGCAATGTatatgtttaatgtgtgtgatgGATGAACACAAAAATCACGATATTGTTTCAGCTGAAGCAGAGAGAGCTGAGAAACAGAAACAGGTTGAAGAGATGGTCATAATATTACAGAACAAAATTCAAAAGAGGCAAAAACAGCTGCAATACTTGAGAACATCTATGAAGCATCGCATGGTGAGTGTTGTTGAACAATAGTCAGCTTGAAATGAGCTGATTTTGTGTGACTCAATGAGTGTTTCTCAACAGACCTCAGCACAGAGAACAGTGGAGCACTGCGAGAAGGTTTTTTCTCAACTCATCCAGTCCATCGAGAGAAGTCGATCTGAGGTCACACAGATGATCAGAGATCGAGAAAAGGAGGCAGCGAGTCGAGCCAAAGAACACGCGAAACTACTGGAGCTGGAGCTTGATGATCTGAAGAGGAGAAACTCTGAGCTGGAGAAGATTTCTCACACAGATGATCACATCTACTTTCTACAGAATTTCCAGTCCGTTTCTGTCCCTCCTGGATCTAAAGCTTCTGGCTTTTTCGGCTCTTATTTTAATGTGAAACCCTCCTTGTCTGTCTTACAAAGCAAAGTAGAGGATTTCTGCAAACTGGAGATGGAAAAGTTTTCTGCTGGAGGAAGATTTAGCAAAATACTGCATGTGGCTGATCCCAAAACCCGTGAGGACTTCTTACAGTATTCCCATCAGTTTACTCTGAATTCAGAGTCGGTGCATAACCACCTCAGTCTGTCAGAGGGGAAGAGAGGAGCTACTTTCACTTCTACACTCCACCAGTATCCAGATCATCTGGACAGATTTGATGTCtggcctcaggtgttgtgcaAGGAGattgtgtgtggacgctgttactgggaggtgGAGTGGAGCGGGAATCATGGTGTGGGATTATCAGTGTCGTATAAGACCATCTGCAGGAAGGGACGAGGTATCGAGTGCAAGTTTGGAAGCAATGATCAGTCCTGGAGATTGTTCTGCTCTGCCTCTAAATGCATATTCAGTCACAACAATGACAGAACTGAACTCCCTGTAGTCTCCAACTCCAGAATAGGCGTGTATGTTGATCAGAGAGCAGGGATTCTGTCCTTCTTTAGCGTTTCTGATTCAGAGATGAGCCTCATACACCGaatccagaccacattcactcaACCGCTCCATCCTGGGTTTATTTTAAATCCGCAGTCATCTGTGAAACTGTGTAATCTAGGGTTATAG

Function

symbol description
ftr19 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090506-5 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000094131

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031533 False 814 mRNA 0.44 2 47944967 47945875
TCONS_00031534 True 1735 mRNA 0.45 5 47945359 47951567

Neighbor

gene id symbol gene type direction distance location
XLOC_015885 ftr26 coding upstream 1475 47935476 ~ 47943492 (+)
XLOC_015884 ftr25 coding upstream 15684 47927026 ~ 47929283 (+)
XLOC_015882 NA coding upstream 27995 47841571 ~ 47916972 (+)
XLOC_015883 ftr23 coding upstream 33220 47905735 ~ 47911747 (+)
XLOC_015881 mbnl1 coding upstream 115680 47708853 ~ 47829287 (+)
XLOC_015887 NA coding downstream 22046 47973613 ~ 47976706 (+)
XLOC_015888 NA coding downstream 29300 47980867 ~ 47998420 (+)
XLOC_015889 klf6b coding downstream 122405 48073972 ~ 48082182 (+)
XLOC_015890 pitrm1 coding downstream 137490 48089057 ~ 48119409 (+)
XLOC_015891 NA coding downstream 311463 48263030 ~ 48264841 (+)
XLOC_015877 NA non-coding upstream 620588 47308209 ~ 47324379 (+)
XLOC_015876 NA non-coding upstream 646869 47295989 ~ 47298098 (+)
XLOC_015874 BX248512.2 non-coding upstream 795398 47148933 ~ 47149569 (+)
XLOC_015873 BX248512.1 non-coding upstream 831313 47112696 ~ 47113654 (+)
XLOC_015892 NA non-coding downstream 324031 48275598 ~ 48276079 (+)
XLOC_015895 NA non-coding downstream 345485 48297052 ~ 48297450 (+)

Expression


Co-expression Network