XLOC_015892


Basic Information

Item Value
gene id XLOC_015892
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 48275598 ~ 48276079 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033683
CACGACATCAAAACATTACACGACAGAGCGTCATCAGTTTGAAAAAACTTGAGTAACGGTTAATAAAAACGTTTCCTAACATAATTCGAAATTATTCTTGAATAAATGCGATAAATTATCAGCCTATATACAGTCCACATGCAGCTTTTAAAATCTAGCATTTAGAGAGAAAACTTGCGAAAAGAAATAGTGAAAGATCTCTGGACCGTTTGACCGTTGTGGATGAAAGGTTTCTATGGGGAATCATGGCTTCAACTAAAAATTTTCTGTATTGATCTACTGAACAACAACAGCAAGGTCacctaacgtta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033683 True 311 lncRNA 0.35 2 48275598 48276079

Neighbor

gene id symbol gene type direction distance location
XLOC_015891 NA coding upstream 10757 48263030 ~ 48264841 (+)
XLOC_015890 pitrm1 coding upstream 156189 48089057 ~ 48119409 (+)
XLOC_015889 klf6b coding upstream 193416 48073972 ~ 48082182 (+)
XLOC_015888 NA coding upstream 277178 47980867 ~ 47998420 (+)
XLOC_015887 NA coding upstream 298892 47973613 ~ 47976706 (+)
XLOC_015893 lpar5a coding downstream 6511 48282590 ~ 48284160 (+)
XLOC_015894 hes6 coding downstream 12382 48288461 ~ 48304696 (+)
XLOC_015895 NA coding downstream 20973 48297052 ~ 48297450 (+)
XLOC_015896 NA coding downstream 104831 48380910 ~ 48387392 (+)
XLOC_015897 CR381673.1 coding downstream 344076 48620155 ~ 48627261 (+)
XLOC_015882 NA non-coding upstream 358626 47841571 ~ 47916972 (+)
XLOC_015877 NA non-coding upstream 951219 47308209 ~ 47324379 (+)
XLOC_015900 NA non-coding downstream 531386 48807465 ~ 48812680 (+)
XLOC_015908 BX323861.1 non-coding downstream 1370879 49646958 ~ 49647989 (+)
XLOC_015912 BX284666.1 non-coding downstream 1579667 49855746 ~ 49856793 (+)

Expression


Co-expression Network