XLOC_015895



Basic Information


Item Value
gene id XLOC_015895
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 48297052 ~ 48297450 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033311
ATTAGTTCATTTTTAGTTCTTCCTGAAAAGTATACAATGCTGACTTTTTTTAGAGCATAAACTCACTTAATCATCATCCTTCTCAAATAAATTTAGCTCGACTTCACAGCTTTTATACATTAgtaacacactcaaaaaaaaaaaaaaaaaactccaagcAAGAAACTAATCTTGTGCAGTGCCTCACTTTCAGCACCCAAGAACTGCGCCAAGACATTAGTGAGTCACGGCAGCGTCTCAAGACGTCAGGTGGTGTGAGCAATGCATCCGCCTCCAGTCTCTCAGCGCCGAGGACACCAGCTCCATCAGCCCACGCAGGCTCTGGAGCATCGCAAATCAAACAGACTTGCTGACAGAGCTACTATCTCCGCCTGGCACTGCCATATTTTTAGGCACGTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033311 True 399 lncRNA 0.44 1 48297052 48297450

Neighbor


gene id symbol gene type direction distance location
XLOC_015893 lpar5a coding upstream 12892 48282590 ~ 48284160 (+)
XLOC_015892 NA coding upstream 20973 48275598 ~ 48276079 (+)
XLOC_015891 NA coding upstream 32211 48263030 ~ 48264841 (+)
XLOC_015890 pitrm1 coding upstream 177643 48089057 ~ 48119409 (+)
XLOC_015889 klf6b coding upstream 214870 48073972 ~ 48082182 (+)
XLOC_015896 NA coding downstream 83460 48380910 ~ 48387392 (+)
XLOC_015897 CR381673.1 coding downstream 322705 48620155 ~ 48627261 (+)
XLOC_015898 CR381673.2 coding downstream 341377 48638827 ~ 48653207 (+)
XLOC_015899 si:dkey-53k12.1 coding downstream 390078 48687528 ~ 48693669 (+)
XLOC_015900 NA coding downstream 510015 48807465 ~ 48812680 (+)
XLOC_015888 NA non-coding upstream 298632 47980867 ~ 47998420 (+)
XLOC_015887 NA non-coding upstream 320346 47973613 ~ 47976706 (+)
XLOC_015882 NA non-coding upstream 380080 47841571 ~ 47916972 (+)
XLOC_015908 BX323861.1 non-coding downstream 1349508 49646958 ~ 49647989 (+)
XLOC_015912 BX284666.1 non-coding downstream 1558296 49855746 ~ 49856793 (+)
XLOC_015915 BX927101.1 non-coding downstream 1905188 50202638 ~ 50203295 (+)

Expression



Co-expression Network