Item | Value |
---|---|
gene id | XLOC_016114 |
gene name | proca |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 5456541 ~ 5475921 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
proca | Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to act upstream of or within blood coagulation and proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in several diseases, including antiphospholipid syndrome; artery disease (multiple); placental abruption; thrombophilia (multiple); and toxic shock syndrome. Orthologous to human PROC (protein C, inactivator of coagulation factors Va and VIIIa). |
id | name | namespace |
---|---|---|
GO:0007596 | blood coagulation | biological_process |
GO:0006508 | proteolysis | biological_process |
GO:0005576 | extracellular region | cellular_component |
GO:0005615 | extracellular space | cellular_component |
GO:0005509 | calcium ion binding | molecular_function |
GO:0004252 | serine-type endopeptidase activity | molecular_function |
GO:0016787 | hydrolase activity | molecular_function |
GO:0008233 | peptidase activity | molecular_function |
GO:0008236 | serine-type peptidase activity | molecular_function |
id | description |
---|---|
ZDB-GENE-060824-5 | Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to act upstream of or within blood coagulation and proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in several diseases, including antiphospholipid syndrome; artery disease (multiple); placental abruption; thrombophilia (multiple); and toxic shock syndrome. Orthologous to human PROC (protein C, inactivator of coagulation factors Va and VIIIa). |
ensembl_id | ENSDARG00000038258 ENSDARG00000093079 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00031810 | False | 2429 | mRNA | 0.45 | 10 | 5456541 | 5466708 |
TCONS_00031811 | False | 2418 | mRNA | 0.45 | 10 | 5456541 | 5475910 |
TCONS_00031812 | False | 1582 | mRNA | 0.47 | 10 | 5457388 | 5475921 |
TCONS_00031813 | False | 552 | lncRNA | 0.45 | 5 | 5463408 | 5466487 |
TCONS_00031814 | False | 1728 | mRNA | 0.45 | 10 | 5467885 | 5475921 |
TCONS_00031815 | False | 554 | lncRNA | 0.45 | 5 | 5474543 | 5475702 |
TCONS_00031816 | True | 870 | lncRNA | 0.40 | 4 | 5474543 | 5475728 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_016113 | NA | coding | downstream | 3019 | 5449781 ~ 5453522 (-) |
XLOC_016112 | wdr33 | coding | downstream | 12796 | 5410432 ~ 5443745 (-) |
XLOC_016111 | si:ch1073-184j22.2 | coding | downstream | 52075 | 5397064 ~ 5404466 (-) |
XLOC_016110 | MFN1 | coding | downstream | 99855 | 5338759 ~ 5356686 (-) |
XLOC_016109 | phb2a | coding | downstream | 257110 | 5178172 ~ 5199431 (-) |
XLOC_016115 | saga | coding | upstream | 4204 | 5480125 ~ 5505094 (-) |
XLOC_016116 | cldn15la | coding | upstream | 32621 | 5508542 ~ 5517438 (-) |
XLOC_016117 | parla | coding | upstream | 67980 | 5543901 ~ 5561019 (-) |
XLOC_016118 | NA | coding | upstream | 225177 | 5701098 ~ 5702648 (-) |
XLOC_016119 | cwc25 | coding | upstream | 233503 | 5709424 ~ 5723786 (-) |
XLOC_016105 | CU929154.1 | non-coding | downstream | 642269 | 4812694 ~ 4814272 (-) |
XLOC_016102 | FO704866.1 | non-coding | downstream | 885438 | 4571013 ~ 4571103 (-) |
XLOC_016100 | NA | non-coding | downstream | 1337726 | 4114011 ~ 4118815 (-) |
XLOC_016095 | NA | non-coding | downstream | 1936375 | 3519583 ~ 3520166 (-) |
XLOC_016123 | NA | non-coding | upstream | 362975 | 5838896 ~ 5840494 (-) |
XLOC_016138 | CABZ01077605.1 | non-coding | upstream | 1290372 | 6766293 ~ 6766407 (-) |
XLOC_016139 | CU694525.1 | non-coding | upstream | 1399830 | 6875751 ~ 6919316 (-) |
XLOC_016140 | CU693440.1 | non-coding | upstream | 1432741 | 6908662 ~ 6908681 (-) |