XLOC_016695 (cbln7)


Basic Information

Item Value
gene id XLOC_016695
gene name cbln7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 39549376 ~ 39558643 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032770
ACAGGCTGAAGGACTAATTCCAGTGCAGAGTTTGTGTCCTCTGGTAATTAACAGAGCAAGAAGCCAGCTTGAAGAAGTAGGATCAGAAAAGCGTCCAAGCAATTTGAAAGCAAATCTTTAAGATGTCCTGCTGTGTGGTGTATCCGCTGCTGTTTCTCTTGTTCAGCTGTGTCTGGATGTCTGAGGTCCAGCAGGAAGAGCACAGAAACAAGACTGAGAGCACTGAGCATTTGGATGTGGAGGAAAGCGACGCCGCTTTAACTTCTGCTGAGTTTCAGGAAAACTTTCTTAGAGAGATCTACACTGAACTGAAGACTCTGAAGGCCAGACAGGAGGTCACTGAAGAGCAGCTGAGGAGAACAGTGGCATTTTCAGCCACTCTTGGACCCATAGGTAACCTTGGACCCTTCAACACTGACATTACTGTGGTTTTCAGAAAGGTCTTTGTGAATGAGGGAGGAGCTTACAACCCAACAACAGACTTTGCAACATTTAAACTGATGTGTGCGATTCCCAATATTGACCAGCAGATGGCGATACAGGATTGAATTTGTGGACGTTGGAAGGAGTCAAAATCAGGTTGATGTGCGACAAGTTTTCAGGCAATAAATTCTGGCTTCTGTTAATGTGAAAGGGC
>TCONS_00032771
ACAGGCTGAAGGACTAATTCCAGTGCAGAGTTTGTGTCCTCTGGTAATTAACAGAGCAAGAAGCCAGCTTGAAGAAGTAGGATCAGAAAAGCGTCCAAGCAATTTGAAAGCAAATCTTTAAGATGTCCTGCTGTGTGGTGTATCCGCTGCTGTTTCTCTTGTTCAGCTGTGTCTGGATGTCTGAGGTCCAGCAGGAAGAGCACAGAAACAAGACTGAGAGCACTGAGCATTTGGATGTGGAGGAAAGCGACGCCGCTTTAACTTCTGCTGAGTTTCAGGAAAACTTTCTTAGAGAGATCTACACTGAACTGAAGACTCTGAAGGCCAGACAGGAGGTCACTGAAGAGCAGCTGAGGAGAACAGTGGCATTTTCAGCCACTCTTGGACCCATAGGTAACCTTGGACCCTTCAACACTGACATTACTGTGGTTTTCAGAAAGGTCTTTGTGAATGAGGGAGGAGCTTACAACCCAACAACAGcggatgcccttccagccacaacacagcaCTGAGAGTGCAATCCTCAGTGgtaggaaacacccacacactgtcCTGTTCACACACTAAAGCCAATTTATTTGATCAAGTTGACATATTGTacgtatttggactgtggggggaaactggagcagctggaggaaacccaggcgaacatgGAGGACGTGCAAACTGACAAAAAGACCTTGAAGAACCAGTGATCCTCTTGCTCTGTAGCAAATGTGCCGCCCCCAAATCAGTCAGtcgcaaaataaaaatattggtaATATTTTATAGAAACGATACATGAATTATCGTGAATTCATGCAAAAACCGATGCATGGATTATgcattaattcatacatttagACTTCATGAATTATCAGAAACTTGTTTTTGGTTAACCACCCCTTTAAATTTT
>TCONS_00032772
ACAGGCTGAAGGACTAATTCCAGTGCAGAGTTTGTGTCCTCTGGTAATTAACAGAGCAAGAAGCCAGCTTGAAGAAGTAGGATCAGAAAAGCGTCCAAGCAATTTGAAAGCAAATCTTTAAGATGTCCTGCTGTGTGGTGTATCCGCTGCTGTTTCTCTTGTTCAGCTGTGTCTGGATGTCTGAGGTCCAGCAGGAAGAGCACAGAAACAAGACTGAGAGCACTGAGCATTTGGATGTGGAGGAAAGCGACGCCGCTTTAACTTCTGCTGAGTTTCAGGAAAACTTTCTTAGAGAGATCTACACTGAACTGAAGACTCTGAAGGCCAGACAGGAGGTCACTGAAGAGCAGCTGAGGAGAACAGTGGCATTTTCAGCCACTCTTGGACCCATAGGTAACCTTGGACCCTTCAACACTGACATTACTGTGGTTTTCAGAAAGGTCTTTGTGAATGAGGGAGGAGCTTACAACCCAACAACAGgTATCTTCACTGCCCCTGTTAAAGGCATCTATTTCTTTACAATCGGTGGACTTTATCAGCCATCTAAAGCTATGGTTCTAGACCTCATGAAAAATGGACAAAAAGTGCTATCCGTTTACAAGTCTTCTAAAGCTAAGCATTATGATTCAGGATCTAGATCTGTCTCTTTGAATCTAGAAAAAGGAGATCATGTCTACATTCAGCTTAGGTCAAAAACATGGATATATGATGATGTAAATGTCCACAGTACATTCAGCGGCCATTTACTTTTTTCTCCACCAATTACTAAGGCATATGTTTtaccagcggatgcccttccagccacaacacagcaCTGAGAGTGCAATCCTCAGTGgtaggaaacaccca

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-655 No description available

Ensembl:

ensembl_id ENSDARG00000095040

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032770 False 637 mRNA 0.45 3 39549376 39558643
TCONS_00032771 False 898 mRNA 0.44 3 39556258 39558643
TCONS_00032772 True 849 mRNA 0.44 3 39556613 39558643

Neighbor

gene id symbol gene type direction distance location
XLOC_016694 BX248328.1 coding downstream 178449 39370811 ~ 39370927 (-)
XLOC_016693 nmnat3 coding downstream 459090 39062754 ~ 39090286 (-)
XLOC_016692 rbp1.1 coding downstream 512772 39028337 ~ 39036604 (-)
XLOC_016691 rbp2b coding downstream 531538 39016066 ~ 39017838 (-)
XLOC_016690 copb2 coding downstream 534246 38997357 ~ 39015130 (-)
XLOC_016696 spsb4a coding upstream 25423 39584066 ~ 39675829 (-)
XLOC_016697 NA coding upstream 51678 39610321 ~ 39612464 (-)
XLOC_016698 slc25a36a coding upstream 172641 39731284 ~ 39759059 (-)
XLOC_016699 NA coding upstream 268061 39826704 ~ 39827511 (-)
XLOC_016700 NA coding upstream 272042 39830685 ~ 40033058 (-)
XLOC_016681 NA non-coding downstream 1354897 38192959 ~ 38194479 (-)
XLOC_016680 NA non-coding downstream 1403675 38144162 ~ 38145701 (-)
XLOC_016662 NA non-coding downstream 1734003 37813663 ~ 37815373 (-)
XLOC_016652 NA non-coding downstream 2132911 37413404 ~ 37416465 (-)
XLOC_016703 NA non-coding upstream 635424 40194067 ~ 40196570 (-)
XLOC_016704 NA non-coding upstream 640174 40198817 ~ 40199780 (-)

Expression


Co-expression Network