XLOC_016698 (slc25a36a)


Basic Information

Item Value
gene id XLOC_016698
gene name slc25a36a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 39731284 ~ 39759059 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032774
ACAGACGCCTTCGACTCCACACGGATCTAGCTCCACAAAAACCGCGTCCCCTGCAGCCACGACCTCGAAATCAGATAGCCGTCTGTGTTGTTTACAAGAACAGAACGGAACAAACTGAAAACAGGTCGGCTGGAGGCAGAAAACAGGCAGCTGCGCACATCGGCAGCCGTTAGCGGACTTGGCTAGCCGCATCGCCGACGCATCTTGCCCGCGAGACGTCGGGCTGAATAACCGTGTGCTTCAGTATTGTCATCCACATAAATAAACCTGAGCCGTGCAACAGAATCGCAGCGGGTTCGGCGGAGCTGTCCGGCTCTTGCTCGCTCTGCAGGCCTGGGTGTGGGTGCGGAGAATGCTAAAGGATGAGTCAGAGGGACACCCTGGTTCATCTGTTTGCTGGAGGCTGTGGTGGCACTGTAGGTGCAATACTGACATGTCCTTTGGAAGTGGTGAAGACGAGGCTGCAGTCTTCTTCTGTGACGTTTTACATCTCTGAAGTTCAGCTCAGCACTGTGAATGGGGCCAGCGTGGCCCGTATGGCCCCACCAGGGCCTCTGCACTGTCTCAAGTTAATACTGGAGAAAGAAGGTCCTCGCTCACTCTTTAGGGGGCTGGGGCCCAACTTGGTGGGAGTGGCTCCATCCAGGGCAATATATTTTGCTGCCTACTCCACATCCAAAGAGAAGCTGAACAATGTGTTTGATCCTGACTCTACTCAGGTGCACATGCTGTCCGCTGGTTTAGCAGGGTTCACTGCCATTACAGCAACCAACCCGATCTGGCTTATAAAGACCCGATTGCAGCTTGATGCCAGgAACCGAGGAGAACGGCGCATGAGTGCGTTTGAGTGCGTCCGGCGTGTCTATCAGTCAGATGGCTTACGGGGATTCTACAGGGGCATGTCTGCTTCTTATGCTGGTATATCAGAGACTGTCATCCACTTTGTCATCTATGAAAGCATTAAACGCAAACTCATTGAGCACAAGGCCAACTCTAACATGGACGACGAAGATGAATCTGTAAAAGACGCTTCAGACTTTGTTGGTATGATGCTGGCTGCTGCCACTTCCAAGACTTGTGCCACATCAATCGCTTATCCTCACGAGGTTATTCGTACCAGACTACGAGAGGAGGGCAGCAAGTATCGTTCGTTCTTCCAAACTCTAAACATGGTGTTCCGGGAGGAGGGTTACAGAGCACTGTACCGGGGCCTCACCACTCACCTAGTCCGACAGATCCCTAACACTGCTATAATGATGTGCACCTATGAGCTGGTGGTCTACCTGCTCAATGGTTAACACATGGAGAGAGACCaggaaagagagagggagacagacagagagatgaacAAGGTGAGAAAGCGAAAGCTAGATGGAAACCGAGAGAGATTGTCGCAGGCTTAGACCAAAGGAAGTAGAACAAATCCAAGAAACGCACGGTTAACCTAGACCCCCTCAAAAGGGTCTGCTAGTTTCCGAGAACGAGAGGGATTTGAGTCTGGACAGCAtttcaaaaaaagaaacagaCAAGTGGTTTGTTCGTTTCGAAATGTTTTCTGAGAAGGACAATCAGAGAGGGGAATGCttgaagaaaaacacaaacctggcagaagaaataacaaaaaaaaaagccatttcaaaaatagtttttgtctGAGCCATtgctttataaaaagaaaaagaaaaaaaacgagCCTGTTGGGATCCGAAGTGACTTTGTaggaaagaaaatatataaatgataaaacagCACACAATGGTGTTTTTCAGATGTGGCACAGTTAAgggtgtttttcttttcttttttcgatCTCACCATTTCATAAACATGGCATTTTTTGCCTTTCCAGCATTGGTTGTTTCAAGCATTCTCCTCTAGAGGTCACCTTCCACTCTTTCCAAACCTGCAGATGGTTGTCCACGCACAATTGTCCATTTGCTGTCGTTGAATTGATGGTCACGTGACCCGTGGCCCCTCATGTGCTTCAAACTGAAGTGTTTCTTCGTTAGGTTCATGTTATGTTTAAccatacttattatttttttttgtgtgtgtgcgtttttgaTGATCATACCGTTGTCCTAATATCAGTATAGTATATATTCGGGTTGCTATTTTAGAATTGGGAGATGTTGTCCTGCTTGCATCActgggcctttttttttttttttactaagatgGTGGAGCGTTCTCGAATTTATCACCACAGTTCATTGCTGCAAAAGCCTATACTTGAATCCCAGGTGTCGGCGAGAGCCAGAGATGTATTTACCGATTGCTAAATGGTAGTGGCTAGTGCTAACTCTGAGCATGTTGCCTACAAACAACATGCCACTTTGTGGCGATATTATTCGTCAAAAGGCAATAGTCAATTTTTTTCCACTTAAGAGTGGGAATACAAGCCGCAGGGTTATGTCCCGCTCTCTGGATTCCTCTAACAGTGGCTTCTGACTGACCGTATATGCACTTTGTGGCCTGTTTAGGCTTGcgcaaacctttttttattttgtttttcagtttgggacaattttaatcttctatTGTAAAACATAGTGTTACTATGTAAGCAAGACAGTGTTTTGCTGAACAGTTCCCTTTGGAAATTCTTGTACAGTTCAGTGTACTAAACTTTTAGTGAAGGATATTCTCgtatgtgtatatactgtatgtatgcatatCAAATATCCAGTGTTCATAACTTAAGTCCACTGATTATGCAGTAGTATTATTTGAATGactgcatttgtttgtgtgtttgatagCTTTATCTCAGAaggatgtaattttttttctttattttttttttctttaattttttatatatatttttgatcattttgttttatcactccTCATTCTGGCCCTTGACTCATTGCTTGACATGGAGTAAGCCCACCCACCCTTTAAACTCTTCCAAAATGTTTTCATCtaattgtttgtttacattaatgTTGTCTGTATGTTCACACCCTCAATTGAAGGATCTCAAACTGttaatattatcatttttttacaattcCGTTTCCTATACATTGGCTTAAAGTGTTAGTTCATTCCAAAATGAAACGTTTGTCATTATCTACTCGCCTTTCTATCATTCCAAACTCCTGCGAATTTTGTTCGTCTTTTGaacaaaaattaagatttttttcatAGCTAAAAGAGATTGCTTGtcctttaaaaaaagtgtaatgaTCAGGAATTCTAATGCCTCAAAAGTTCTTAAAGGGATGCAAATTATAAGATTATAAATTGAGTGGTTCAGGTCATCTGAAGAGACATGTTTGATGTCAATCAACAAATTTATTCATTAGTCTTTTTTTATCTAACGTATAAACATTGATCAGCAAACAGAAGCTCAATCACACCTGCTTGACCTGTAACAACAAATGTCATTGGTTGTTGCGCATCAAGCAAGCAAACTTTGTTTCTGTGCTAAATACATTGCTATCCAGTCTTTATTCGGATTgacatttcttcttctttttcttcttcttctacttcgtatttattataataatactaataataataaatatcttgATTTGATGTCTTTATTCATTTGAAGATGATTAAATTAGGTGAGTTTGGAATGACGGAAGAGCAAATGACAGAATATTGgagtaaaataatagtttaaaatgataatatGAGCCTATTATATAAAGCCTCATGCTGATAGATCCCATGCAAAGTCTTTAGTGGTcctgtaacatttttaatagtatcAGTATTTTTTCTaggagcaaaaaataaaacaaaagacatgGTTTTGTTAGCTTCCATCATTCATACGCGAAAGTGATGTGCATTTTGGCATTGTGTTTTCATACATACGTTTTTTCTGTCCAGTTTGAGTGCATTTGGAATCCTCAGTATCTGTAATGCTGCAGATTACGCTCTGAAACACTGTAATGCTCATCAACACACTTTATATTTCATTACTGATGATTATACACACAACATCAAATGTTATGCAATTAGAGCCGGACTCATAGCTAACATGATTTCGGTCAGCAAATATTGCTCTAATTATTGAacagaaatcatttttgttttcagaaaactATTTAATATCCTTAAAAAAGTGTTGTTGATGGATGAGTAAAGTGAGTGCATAGATACTCGTGTTTAGTTTTAAGAAGTAATgccctgttaaaaaaaaagtgatctcttgcagatgtgaatgacTGACGCTCTTAAGTTTGCTGTCAACATATGCACTTGTAACTTCACAGTCTCACAGAGACTTTAATGGCATTATGAAGATACTCAAGAACAAAAGGCATTTTCAGAAAGCGATGTTGGAACATTCAGACAGACTTGAGCATTCAGTTAACTGAGCCTAACTGTTTGACAGAAGTATTGAACATGACGGATTAATCATTTCAGAATCTTCATTTCAAGTTCAGTGGCATATTCGGCAGTTTTCATGTGTAGTTGTCTGTACTGCGCAGTCTAACATGACCAACactaacatttttttgtttgtcaacacctgttattttctttctgtttttgacttttttttttgttttgttttgttttattattattattattttttttttttttagtaaatgtgGCCTATTTTTGCTGGTTATGTGATCATACCTCTTTTTGTACAAACTGTCAATAAAAAACTATGAAAAACCCA
>TCONS_00032775
ACATATAACCAGCCATAAGCATATTTTAGGGACGTCCACAGCACTTCTCTTAAAAGTTGAGTTTCTTTAGGGACAATTTGTCTGTTCTAGAGCCATTAGATCTGCTGAATGTTCTGTGCTCTGAGTTACTTAGACAGTATCACTTCTAAGCCTGATCTAGATCATCTCTTTTTCCCAGGGTTCACTGCCATTACAGCAACCAACCCGATCTGGCTTATAAAGACCCGATTGCAGCTTGATGCCAGgAACCGAGGAGAACGGCGCATGAGTGCGTTTGAGTGCGTCCGGCGTGTCTATCAGTCAGATGGCTTACGGGGATTCTACAGGGGCATGTCTGCTTCTTATGCTGGTATATCAGAGACTGTCATCCACTTTGTCATCTATGAAAGCATTAAACGCAAACTCATTGAGCACAAGGCCAACTCTAACATGGACGACGAAGATGAATCTGTAAAAGACGCTTCAGACTTTGTTGGTATGATGCTGGCTGCTGCCACTTCCAAGACTTGTGCCACATCAATCGCTTATCCTCACGAGGTTATTCGTACCAGACTACGAGAGGAGGGCAGCAAGTATCGTTCGTTCTTCCAAACTCTAAACATGGTGTTCCGGGAGGAGGGTTACAGAGCACTGTACCGGGGCCTCACCACTCACCTAGTCCGACAGATCCCTAACACTGCTATAATGATGTGCACCTATGAGCTGGTGGTCTACCTGCTCAATGGTTAACACATGGAGAGAGACCaggaaagagagagggagacagacagagagatgaacAAGGTGAGAAAGCGAAAGCTAGA
>TCONS_00033893
GGAGTCACTTTATTTGGCCTCCGGCAAGCGATGGTATTCGGGCCTATTGTGTTACTCCAGAATCAGAGGGAAAAGGTTTGGAAAGTTAATACTGGAGAAAGAAGGTCCTCGCTCACTCTTTAGGGGGCTGGGGCCCAACTTGGTGGGAGTGGCTCCATCCAGGGCAATATATTTTGCTGCCTACTCCACATCCAAAGAGAAGCTGAACAATGTGTTTGATCCTGACTCTACTCAGGTGCACATGCTGTCCGCTGGTTTAGCAGGCCTTTACTGTAGCTTTCACCCTGCGTGAGGGTCTGTGAGCCAGCCTGCTCTGCCCCCCATATCTGCAGGCTTCGTCCTGCAGCTGTGAGGAGAGGAGCTTTGCCCCTCCCCTGGTTCACTGCCATTACAGCAACCAACCCGATCTGGCTTATAAAGACCCGATTGCAGCTTGATGCCAGgAACCGAGGAGAACGGCGCATGAGTGCGTTTGAGTGCGTCCGGCGTGTCTATCAGTCAGATGGCTTACGGGGATTCTACAGGGGCATGTCTGCTTCTTATGCTGGTATATCAGAGACTGTCATCCACTTTGTCATCTATGAAAGCATTAAACGCAAACTCATTGAGCACAAGGCCAACTCTAACATGGACGACGAAGATGAATCTGTAAAAGACGCTTCAGACTTTGTTGGTATGATGCTGGCTGCTGCCACTTCCAAGACTTGTGCCACATCAATCGCTTATCCTCACGAGGTTATTCGTACCAGACTACGAGAGGAGGGCAGCAAGTATCGTTCGTTCTTCCAAACTCTAAACATGGTGTTCCGGGAGGAGGGTTACAGAGCACTGTACCGGGGCCTCACCACTCACCTAGTCCGACAGATCCCTAACACTGCTATAATGATGTGCACCTATGAGCTGGTGGTCTACCTGCTCAATGGTTAACACATGGAGAGAGACCaggaaagagagagggagacagacagagagatgaacAAGGTGAGAAAGCGAAAGCTAGA
>TCONS_00032776
GGAGTCACTTTATTTGGCCTCCGGCAAGCGATGGTATTCGGGCCTATTGTGTTACTCCAGAATCAGAGGGAAAAGGTTTGGAAAGTTAATACTGGAGAAAGAAGGTCCTCGCTCACTCTTTAGGGGGCTGGGGCCCAACTTGGTGGGAGTGGCTCCATCCAGGGCAATATATTTTGCTGCCTACTCCACATCCAAAGAGAAGCTGAACAATGTGTTTGATCCTGACTCTACTCAGGTGCACATGCTGTCCGCTGGTTTAGCAGGCCTTTACTGTAGCTTTCACCCTGCGTGAGGGTCTGTGAGCCAGCCTGCTCTGCCCCCCATATCTGCAGGCTTCGTCCTGCAGCTGTGAGGAGAGGAGCTTTGCCCCTCCCCTGGTTCACTGCCATTACAGCAACCAACCCGATCTGGCTTATAAAGACCCGATTGCAGCTTGATGCCAGgAACCGAGGAGAACGGCGCATGAGTGCGTTTGAGTGCGTCCGGCGTGTCTATCAGTCAGATGGCTTACGGGGATTCTACAGGGGCATGTCTGCTTCTTATGCTGGTATATCAGAGACTGTCATCCACTTTGTCATCTATGAAAGCATTAAACGCAAACTCATTGAGCACAAGGCCAACTCTAACATGGACGACGAAGATGAATCTGTAAAAGACGCTTCAGACTTTGTTGGTATGATGCTGGCTGCTGCCACTTCCAAGACTTGTGCCACATCAATCGCTTATCCTC

Function

symbol description
slc25a36a Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A36 (solute carrier family 25 member 36).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:1990519 pyrimidine nucleotide import into mitochondrion biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0015218 pyrimidine nucleotide transmembrane transporter activity molecular_function
GO:0005347 ATP transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-415 Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A36 (solute carrier family 25 member 36).

Ensembl:

ensembl_id ENSDARG00000038731

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032774 False 4657 mRNA 0.40 7 39731284 39759059
TCONS_00032775 False 803 lncRNA 0.47 3 39734569 39737898
TCONS_00033893 False 1001 lncRNA 0.51 7 39734569 39752556
TCONS_00032776 True 730 nonsense_mediated_decay 0.51 6 39735552 39752556

Neighbor

gene id symbol gene type direction distance location
XLOC_016696 spsb4a coding downstream 55455 39584066 ~ 39675829 (-)
XLOC_016697 NA coding downstream 118820 39610321 ~ 39612464 (-)
XLOC_016695 cbln7 coding downstream 172641 39549376 ~ 39558643 (-)
XLOC_016694 BX248328.1 coding downstream 360357 39370811 ~ 39370927 (-)
XLOC_016693 nmnat3 coding downstream 640998 39062754 ~ 39090286 (-)
XLOC_016699 NA coding upstream 67645 39826704 ~ 39827511 (-)
XLOC_016700 NA coding upstream 71626 39830685 ~ 40033058 (-)
XLOC_016701 epha4a coding upstream 308749 40067808 ~ 40136024 (-)
XLOC_016702 si:ch211-122l24.6 coding upstream 422574 40181633 ~ 40191603 (-)
XLOC_016703 NA coding upstream 435008 40194067 ~ 40196570 (-)
XLOC_016681 NA non-coding downstream 1536805 38192959 ~ 38194479 (-)
XLOC_016680 NA non-coding downstream 1585583 38144162 ~ 38145701 (-)
XLOC_016662 NA non-coding downstream 1915911 37813663 ~ 37815373 (-)
XLOC_016704 NA non-coding upstream 439758 40198817 ~ 40199780 (-)
XLOC_016705 NA non-coding upstream 446849 40205908 ~ 40211792 (-)

Expression


Co-expression Network