XLOC_016716


Basic Information

Item Value
gene id XLOC_016716
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 41233349 ~ 41235532 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033911
TAATGAGCTAGTAGGGTTACATAATGGTTTGGTATtactgtgaattgtgacttaaactaaagtgttaccgctTTAAAAGAAGCCTAAATTTAGGCTGTTTAGACAGTCTATATACAGTATGTCAaacaatagtccaaaaatagactagtcatcaagACAGATTGAACAGATTCACCTCTGTAGTTATTTGTTCCTGTCTGTTTGCTGAATAGTCTATTTTTGAACTTTAGTTAGACATATATTAGTACATATATTAGTTATATCAATTAAAGAGCCCAaatttagcattgttttagcCAAAATAACTATGTTTTGATGTCAATTAGATGTcctttattttactattaataaatagctaattagtagtttataaaACTAGTGcggttagttaatggtttgttattaTCGTAAATTGTGACCTAGACTAAAGTGCAAGCATGACATGCCAAATGaacatagAACGTTCAACTCCAGGGACATAATGGCACAGAGCAGATATATGCAGAGACATAGCCTACATAACAAATCAGACCCATTTGAACTACACTGAATGCTAAAGTAGTAAAGTAGAGAAATTGTTGACATAAAAATGCTATTGGCTATCTTCAAAAGGGGGTGGGACTACCCAACTCACCCCATGTTTCAGTTGAAATGACATCACACATCAAACAAAGCTGCACATTTCAAGGCACTTCAGTGGACCTTTAAAGCGACAGGGGAACATTTGATCTCACTGCTGACTCGCAAACAACCTAACATAACACGTTTGATGTGACTGCATTTGAAAGCAGGAGCGTTTGAGGTAGACGCAGGACTGGCGTGAATGGGCTCGGGCGAATGTCTTTCTAGCGTCGCCTGACTGCGCGTGATAAAGCTGCCTTTAAAAGGCCCGGTGTCGGCTTGGCTTTCTTTTATCCAATTACAGTTGTGATTACCCTTAGAAGATGGAGGCTTTCTTGCCTGTGTGGGGCCTCGACTGAAATGTTAAGGATATAAAGTGCTCAGAGACATTACACATGCACTCTTGTATGGAAATGTAAGCCTCCAGAGCCGCCTTCCCCCTCAAAATAACTATGATATCATGTGTTTGACAGATTGTGCAGGGCATAATAACCTCCTGTTAGCTACCGCTGCAGAATGAGCCTTCCTCCAAATATAACAATATGTTTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033911 True 1172 lncRNA 0.39 2 41233349 41235532

Neighbor

gene id symbol gene type direction distance location
XLOC_016715 LO018352.1 coding downstream 21255 41211978 ~ 41212094 (-)
XLOC_016713 hs6st1a coding downstream 109336 40901997 ~ 41124013 (-)
XLOC_016712 uggt1 coding downstream 343085 40830768 ~ 40890264 (-)
XLOC_016711 BX005042.1 coding downstream 428381 40786665 ~ 40804968 (-)
XLOC_016710 NA coding downstream 463545 40766601 ~ 40769804 (-)
XLOC_016717 BX890557.1 coding upstream 186074 41421606 ~ 41421722 (-)
XLOC_016718 NA coding upstream 268945 41504477 ~ 41518340 (-)
XLOC_016719 d2hgdh coding upstream 310739 41546271 ~ 41562868 (-)
XLOC_016720 znf622 coding upstream 327541 41563073 ~ 41571454 (-)
XLOC_016721 zgc:110158 coding upstream 341975 41577507 ~ 41723487 (-)
XLOC_016709 NA non-coding downstream 521086 40622954 ~ 40712263 (-)
XLOC_016708 CR931819.1 non-coding downstream 637855 40595375 ~ 40595494 (-)
XLOC_016722 NA non-coding upstream 516308 41751840 ~ 41772041 (-)
XLOC_016725 BX663525.1 non-coding upstream 710443 41945975 ~ 41946896 (-)
XLOC_016727 BX663525.2 non-coding upstream 737005 41972537 ~ 41983756 (-)

Expression


Co-expression Network