XLOC_016727 (BX663525.2)


Basic Information

Item Value
gene id XLOC_016727
gene name BX663525.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 41972537 ~ 41983756 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032813
TCACACGCCAGAACGCAGTTGGAGTCTTCATTGCCCACTGCAACAAAAATATCCCGTGGCATCGGAACACATGACCCAGGAATCGTTTTTTGAAGACATGAGGCTTGTTTATTACAACCACAAGCACCACAACTACCCTACTACTGTATGTCGTTGTTCAAACAGAAAAGGGGAAGGGCATAACTGGCCGGTGTTTCGCCCACACTACTAGGAAAACGAAACTCATAAAAACGCCCGTGGGTAGTGAGAATGCAAGAGATTTACATTAGGTTTTCGCTGTGTACACTTCATGGACTTAGTTTAGCGTGCATGTGACCTCCCGCCTCCCTCCTCGAAGATGCAAAGGTTAAGTTGACAGCAGTACGTGCCAGCTGAACAAGACGTTGTGCGTTATGTCTTGAATCCGTAGAAATGTCGACATCACACTCGAGAGATGCTCAGCTGCAGCAGTTCATGCAGATGTATGAGCTGAGAGCTGTTTGTAATGGCTGTACTGAAAAACACTCTCACATTTCCTACACCATCATTGCAACACCTCACCGTTGCTCTCATGATGTCCTGCTAGCCAGAGCAAAGGTCAGAGGTTCCAGATGGAGCCGTGTGTTCCAGCGGCCCACTCACCCACGACCGCAACGATACGAGGTTTGCTGGTATTTTCAGGAGGATGTGGGGTGCCGTATACATCGAGACAGATGCACGTTTGCCAGCAGTCCAGAAGAGGCTGCGGTGTGGAACttgcaaaaacacacaaatcttgATCACAGAACAATAATTCATCTGATTACTCAGAGAAAGCGACGGGCTGAGAGCAAGAAAGAAGCTCAGCCGAGTTTTCAGGAGCTTTCTTCATACCAGGAAAAACTTCTGGAAGAATACAGAAGCAGCAGCAACGAGATTCTTGTTATCTCTGAGCATGTAGATGATGTGCGTGTTACACACGATGAGAATCTCAGTATGGACTGTTTACAAGAGGACAATGAAATCAGATGGAAATTCACAATCACCACTGAGGTCAGAAACACACGCTAACCTGCATCAGCTTACATTCAGCtaatattaaacttattttaataacacACTAATAATAACctagtttgttttgtgtgtgtgtgtgtgtatgtgcatgtctAGAGATCCTTGGCTCACGTAGCTCTACTAAAAGTGGAAAATGGTGCTGTTTTCTCTTTGAGTGATAGTTTAAGAAACACCATCCCCCCAATCACACACATAGCAGGCCACGAGCTTCGTTCCTCTCAGTCCACCTACCAGCTGAGTGTGTCTTTCCTGTCTTTCCACCCTGGTGTGTACGAACAATGGCTGGTGTTTGATTTTGACATGCGACCAGTTCTGCTCAGGAAACTGAAGGTGAGGGTTGGACAGCAGTTCCTTGTCCAGCCTGAAGAGGCAGAAGAGAGTGAATGTGCTGAGATTCTTTCCAATGAGCGCTGGAACAGGGGAAACAGGGTTATCGTGCCCTTCTTCGCCAGAAAGGAGGAGGACGAGCAGTTGCTCAGTAAATACAAACCACCTCAACTGAACCTGCAGTTCAATCCACATGCAGATCATAGTTTGCCACTTCATCGGGAAAACTACAGAGAGAGGGCTCACCACTTCCTGTTCAGGGAGGAAATTGCAGAGGAGGAGCTCATTAGCAGGTATAGACAGCTTGTAGAAATAGTGCACTTGAAATGTATGCTGTGGTGTAAATTTactatattttctttatttttgtggaTGTATTCCCAAAAccagttaaacataaattgtgcatCAATGCTATGCTAAAGTTGAGGTGTGGGTTTAAGTTATGTTATAGGTTAATATTCGTGTTCAGTGTTCCAGTCAACAATTCTGAAACCAACAGAagaacaattaaattaattagatGCAGGATTTACTGGTCTTCTGTTGgttttagaattttcattttcaaaatcccataataggggctctttaattagtatgt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117671

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032813 True 1966 lncRNA 0.44 3 41972537 41983756

Neighbor

gene id symbol gene type direction distance location
XLOC_016726 si:dkey-97a13.6 coding downstream 8135 41949186 ~ 41964402 (-)
XLOC_016725 BX663525.1 coding downstream 25641 41945975 ~ 41946896 (-)
XLOC_016724 ebi3 coding downstream 29871 41936603 ~ 41942666 (-)
XLOC_016723 keap1a coding downstream 111497 41835025 ~ 41861040 (-)
XLOC_016722 NA coding downstream 200496 41751840 ~ 41772041 (-)
XLOC_016728 gbp1 coding upstream 37159 42020915 ~ 42035307 (-)
XLOC_016729 cspp1b coding upstream 55280 42039036 ~ 42065069 (-)
XLOC_016730 cspp1b coding upstream 84402 42068158 ~ 42071558 (-)
XLOC_016731 si:dkey-97a13.12 coding upstream 104700 42088456 ~ 42091926 (-)
XLOC_016732 adhfe1 coding upstream 111731 42095487 ~ 42109575 (-)
XLOC_016718 NA non-coding downstream 454197 41504477 ~ 41518340 (-)
XLOC_016717 BX890557.1 non-coding downstream 550815 41421606 ~ 41421722 (-)
XLOC_016716 NA non-coding downstream 737005 41233349 ~ 41235532 (-)
XLOC_016743 NA non-coding upstream 612168 42595924 ~ 42597593 (-)
XLOC_016745 NA non-coding upstream 682146 42665902 ~ 42748662 (-)
XLOC_016746 NA non-coding upstream 694267 42678023 ~ 42678382 (-)
XLOC_016747 NA non-coding upstream 724913 42708669 ~ 42710429 (-)
XLOC_016748 NA non-coding upstream 730043 42713799 ~ 42717726 (-)

Expression


Co-expression Network