XLOC_016747


Basic Information

Item Value
gene id XLOC_016747
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42708669 ~ 42710429 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033919
tactgttccaacttttttaaaatgtataaccaaaattggaatacacGTGTTTTGTTAAaggaaaaacattaataatgtttgttgtattgtctgcaatgaagtacaactcaaagtaaatttagaaatcacttcttacttttttatttgcgttttccatatggtcccaactttttctgttttggggttatataaaacattttataatcacTGAATTGTGCATTGTTTTTCTCCATGTCTGCAAATGTTGAATTTACCTTTACTAGATATCTTTTCAATCTCTTCTCTGCAGAAATGCTCCAGTTTCTTTCTCAGATGAGACAATTTACCAACATCATCAAAAGAGATACGAGAGCTGACAGTGATGCTGGATGAGTCTGTAGATCCAGGAGGAGAAGAGAGAGACTGGAAACTCTACACAAAGACACCACGACAGGAATATAAGAAAATCAGATACTTAACTTTTATTAAGCTCAATGTGCTGTTTGTGAGATCTTTTTTACCTTGAGAAAATGGATGTGATGGTCTGTGTGTGAAAGCTGCTCCAGCTCAGTGTTTCTTCTCCTCAGATCATCAATCTCCTGTTCCAGTTGCTTCAGTCGTTCTTCAGCTCGACCCTCTGCAGCCTTTTGCTGATCTGTGATCAGCTGTGTCACCTCAGAGCAGCTTCTCTCAAAGGAGAAGATGAGCTCAGTAAAGATGCTCTCAGTGTCCTCCACTGCTGCCTGTGCAGAGCGCTGTTaggacacacagagagagaagcaGCAGAATCAGTCATTTACTCAGCTCTTACTGCTGCCACACAGCCTGCTTCCCACAGGGGCTTTAGTGGGACTCAAATGCTCCAGCACTGGGCTCCTCACTGACTGACTGCAGGACAGTCCTAACTGAGTCTCAATCAGCTCTTCCAGCAGCCAACAGTTGATCTTCTGCTAAAAACTCACCTTGTGAGACTCTACAGCTGCTCTCAGCTCCTCTCGCTCCTTCTGTCTCTCCACCATTCTCTGATGGGTTGTTTTTTGCATTTCAGCCAGTTGAATCTGCAGGAATACAAAATGCAAGCTAAAATGAAAGTTGACCCAATCCCAAAAGCTATGTGGGATCAAAACTGTTTCTTAAAATGGGTTAGAAAGATGTATAAAATTATTTCTGTAGCACATACCTTTTTGTCAGTCCACTCTGCTGCAGCTGATACAGTGTCGTGGTTTTTGTGTTTATCCATTGTACACAGATAACAAATACAGCACTGATCTGTTCGACAGAAAATCTCCAGTAGTTTCTCATGTAGAGGGCAGATCATCTCCTGCAGTCGTCCAGTGGCATCAGTCACTTTGTGTCGCTTTCTAGAATGAAATTCTTCATGACGTTGAAAGTCTTGGAGTGAAGGACTGTCTGCACTGAGGGCAGCTGTAGACTCCTTTCCGCTCATCCTGATCCCAGCAGTCTGAAATACAGCTCATGCAGTAACTGTGTCCACAGGGAATGGCCACTGAATCCTTCAGTAGATCCAGACAGATTGAACAGCTGAACTGTTCCTGAGCCAAACAAACACTGGATTCTGCCATTTTTTACAGCACAAACTGAAAGGAATCCTCAACTCTTCGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033919 True 1603 lncRNA 0.42 2 42708669 42710429

Neighbor

gene id symbol gene type direction distance location
XLOC_016744 myo10 coding downstream 3385 42605252 ~ 42705284 (-)
XLOC_016746 NA coding downstream 30287 42678023 ~ 42678382 (-)
XLOC_016743 NA coding downstream 111076 42595924 ~ 42597593 (-)
XLOC_016742 dip2cb coding downstream 150120 42496498 ~ 42558549 (-)
XLOC_016741 esyt2a coding downstream 216224 42419841 ~ 42492445 (-)
XLOC_016748 NA coding upstream 3370 42713799 ~ 42717726 (-)
XLOC_016749 NA coding upstream 8608 42719037 ~ 42771978 (-)
XLOC_016750 adcy8 coding upstream 65795 42776224 ~ 42871286 (-)
XLOC_016751 NA coding upstream 225452 42935881 ~ 42936238 (-)
XLOC_016752 oc90 coding upstream 232123 42942552 ~ 42960353 (-)
XLOC_016727 BX663525.2 non-coding downstream 724913 41972537 ~ 41983756 (-)
XLOC_016725 BX663525.1 non-coding downstream 761773 41945975 ~ 41946896 (-)
XLOC_016722 NA non-coding downstream 936628 41751840 ~ 41772041 (-)
XLOC_016753 BX511268.2 non-coding upstream 251799 42962228 ~ 42962344 (-)
XLOC_016754 NA non-coding upstream 252433 42962862 ~ 42978612 (-)

Expression


Co-expression Network