XLOC_016761 (ftr12)


Basic Information

Item Value
gene id XLOC_016761
gene name ftr12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 43144938 ~ 43151358 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032866
ATGGCAGAAGCTGGTATTTCGTGGTCTCAGAATCAGTTCAGCTGTTCAATCTGTCTGGATCTACTGAAGGGTCCAGTAACTATTCCCTGTGGACACAGTTACTGTATGCGCTGTATTTCCGGCTATTGGGATCAGGATAAGCAGAGGGGAGTCTACATCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGAGCAACTCAAGAAGACCAAACTACAAGCTGCTCGTCCTGCTCACTGTTACTCTGAATCTGCAGATGTGGAGTGTGATGTTTGTACCGGAGACAAAAACAAAGCCGTCAAATCCTGTCTGGTGTGTCTGAACTCTTACTGCCAAAATCATCTTGAACAACACGAGAGTTTCTTCAGAGGTAAAAGACACAATCTGATGGACGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAAACTACTGGAGGTTTTCTGCCGCACTGATCAGTGCTGTATTTGTTTGCTGTGTGTGGATGAACACAAAAACCATGAGATCGTATCAGCTACAGCAGAGAGGACTGACAAACAGAGGCAGTTGGAGGAAACCCAGAGTAAACATAATCAGAGAATCCAGAGGAAACAGGAGGAGTGTGTGGAGCTGAGAGTGGCTATAGAGTCTCAGAAGTGCTCTGCACAGGCAGCAGTGGAGGACACTGAGAGGATCTTTACTGACCTCATCCGCTCCATTGAGAGAAGACGCTCTGAGGTGACGCAGCTGATCAGAGATCAGGAAAAGGCACAAGTGAGTGCAGCTGAAGGACGACTGGAGCGACTGAAGCAGGAGATTGATGATCTAAGGAGGAGAGACGCTGAGCTGGAGCAGCTTTCACACACAGACCATCACATCCATTTCCTCCAGAGTTTCCAGTCTCTCTCTACTCCTCCTGGATCTACAGACTCATCCAGCATCACTGTCAGCTCTTCTCTCTCTTTTGATGATGTTGGTAAATCTGTGTCTCGTCTGAGAGAGAAACTGGAGGATTTCTGCAGAGAGGAGATAGAAAAGATATCAGTGAGAGGCATAACCAGCATTCAAAAACCTGAACTAAAGACCCGTGAGGACTTCCTCCAATATTACCGTCCGCTCACTTtggatccaaacacagtgaataatTGCCTGGTGCTGTCTGAAGGGAACAGAGTGTTTGAACACACTTCTACAAACCAGcagtatcctgatcatccagacagatttgattgtTTTCTTCAGGTGTTGTGTAGAGAGAATGTGtatggacgctgttactgggaggtgGAGTGGAGTGGTGATGTGGAAATATTAGTGGCTTATAAAAGCATCAGCAGGAAGGGACTGGGAGATGAGTGCGGGTTTGGACGTAATGATCAGTCCTGGGGTTTGTCCTGCTCT
>TCONS_00032867
ATGGCAGAAGCTGGTATTTCGTGGTCTCAGAATCAGTTCAGCTGTTCAATCTGTCTGGATCTACTGAAGGGTCCAGTAACTATTCCCTGTGGACACAGTTACTGTATGCGCTGTATTTCCGGCTATTGGGATCAGGATAAGCAGAGGGGAGTCTACATCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGAGCAACTCAAGAAGACCAAACTACAAGCTGCTCGTCCTGCTCACTGTTACTCTGAATCTGCAGATGTGGAGTGTGATGTTTGTACCGGAGACAAAAACAAAGCCGTCAAATCCTGTCTGGTGTGTCTGAACTCTTACTGCCAAAATCATCTTGAACAACACGAGAGTTTCTTCAGAGGTAAAAGACACAATCTGATGGACGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAAACTACTGGAGGTTTTCTGCCGCACTGATCAGTGCTGTATTTGTTTGCTGTGTGTGGATGAACACAAAAACCATGAGATCGTATCAGCTACAGCAGAGAGGACTGACAAACAGAGGCAGTTGGAGGAAACCCAGAGTAAACATAATCAGAGAATCCAGAGGAAACAGGAGGAGTGTGTGGAGCTGAGAGTGGCTATAGAGTCTCAGAAGTGCTCTGCACAGGCAGCAGTGGAGGACACTGAGAGGATCTTTACTGACCTCATCCGCTCCATTGAGAGAAGACGCTCTGAGGTGACGCAGCTGATCAGAGATCAGGAAAAGGCACAAGTGAGTGCAGCTGAAGGACGACTGGAGCGACTGAAGCAGGAGATTGATGATCTAAGGAGGAGAGACGCTGAGCTGGAGCAGCTTTCACACACAGACCATCACATCCATTTCCTCCAGAGTTTCCAGTCTCTCTCTACTCCTCCTGGATCTACAGACTCATCCAGCATCACTGTCAGCTCTTCTCTCTCTTTTGATGATGTTGGTAAATCTGTGTCTCGTCTGAGAGAGAAACTGGAGGATTTCTGCAGAGAGGAGATAGAAAAGATATCAGGT

Function

symbol description
ftr12 Predicted to enable zinc ion binding activity. Is expressed in gill; liver; muscle; and pleuroperitoneal region.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-196 Predicted to enable zinc ion binding activity. Is expressed in gill; liver; muscle; and pleuroperitoneal region.

Ensembl:

ensembl_id ENSDARG00000074118

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032866 False 1428 mRNA 0.48 6 43144938 43151358
TCONS_00032867 True 1074 mRNA 0.48 4 43149869 43151358

Neighbor

gene id symbol gene type direction distance location
XLOC_016760 ftr14 coding downstream 9238 43131147 ~ 43135700 (-)
XLOC_016759 ftr13 coding downstream 14008 43128362 ~ 43130930 (-)
XLOC_016758 lrrc6 coding downstream 20191 43098237 ~ 43124747 (-)
XLOC_016757 kcnq3 coding downstream 61183 43014379 ~ 43083755 (-)
XLOC_016756 kcnq3 coding downstream 134542 43001512 ~ 43010396 (-)
XLOC_016762 crema coding upstream 7813 43159171 ~ 43196595 (-)
XLOC_016763 NA coding upstream 226744 43378102 ~ 43379093 (-)
XLOC_016764 CABZ01058723.1 coding upstream 358144 43509502 ~ 43517018 (-)
XLOC_016765 CABZ01058721.1 coding upstream 386488 43537846 ~ 43545342 (-)
XLOC_016766 NA coding upstream 415787 43567145 ~ 43571760 (-)
XLOC_016755 NA non-coding downstream 157968 42981204 ~ 42986970 (-)
XLOC_016754 NA non-coding downstream 166326 42962862 ~ 42978612 (-)
XLOC_016753 BX511268.2 non-coding downstream 182594 42962228 ~ 42962344 (-)
XLOC_016751 NA non-coding downstream 208700 42935881 ~ 42936238 (-)
XLOC_016749 NA non-coding downstream 372960 42719037 ~ 42771978 (-)
XLOC_016770 NA non-coding upstream 478395 43629753 ~ 43630083 (-)
XLOC_016786 BX323035.1 non-coding upstream 1371498 44522856 ~ 44524381 (-)

Expression


Co-expression Network