XLOC_016763


Basic Information

Item Value
gene id XLOC_016763
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 43378102 ~ 43379093 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033924
TCTATAGGCATAAGAGGTTTTAATTCCCCCAATTCCAATCGTCATATTAAGTTCACACTTGATCCAGATATGAATAATCTAGATTTAAATTCAACGTCATAAATACTACACAATTTCAGTCTAAAAACATTGCTTTTGACTCAAACGCACATACTCCCCTTCCtgcttctgtctctctctctctttctttttctctctctctctctctctctctctctctctctctctctcacacacacacacacaacaattcaGCCAATCACAGTTCTTGCCTTAATCATGATCTGCCGAAGTCACGGTGATATGGTCGAACAGATGAATGGTGGGGTGAACAGTCCAGATGGATGAACACATGGTGATGTTAGCATTGTTAGCAGATAATGTCAGTGTCAGAGGTGACATGCTCCTGCATGCAGCAGTCTCAGGTTGTTAGCAGTTAGCATTAGCCCATGCCTGGAGGTCATTTATCAGACTTGTCTTATTCCGTCCTGGGAGCTCCCAGAGATCATGGGCTGTATGTCCAGTGATCATGggtgcacacacacagctcacaCACTCACCCAGGGCTGCTCCATGCTGTAGGAGCGATGGCGATCATCGGGTTCAGTCTCCTCCTGTCGGACCTGCTGGAACTCCTGCCGCAAGCGCTGGATTCGGTCGTGGTTACTCGGCGTCAGCCTGtc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033924 True 683 lncRNA 0.47 2 43378102 43379093

Neighbor

gene id symbol gene type direction distance location
XLOC_016762 crema coding downstream 181507 43159171 ~ 43196595 (-)
XLOC_016761 ftr12 coding downstream 226744 43144938 ~ 43151358 (-)
XLOC_016760 ftr14 coding downstream 242402 43131147 ~ 43135700 (-)
XLOC_016759 ftr13 coding downstream 247172 43128362 ~ 43130930 (-)
XLOC_016758 lrrc6 coding downstream 253355 43098237 ~ 43124747 (-)
XLOC_016764 CABZ01058723.1 coding upstream 130409 43509502 ~ 43517018 (-)
XLOC_016765 CABZ01058721.1 coding upstream 158753 43537846 ~ 43545342 (-)
XLOC_016766 NA coding upstream 188052 43567145 ~ 43571760 (-)
XLOC_016767 itgb1b coding upstream 198201 43577294 ~ 43583896 (-)
XLOC_016768 epc1b coding upstream 206478 43585571 ~ 43605556 (-)
XLOC_016755 NA non-coding downstream 391132 42981204 ~ 42986970 (-)
XLOC_016754 NA non-coding downstream 399490 42962862 ~ 42978612 (-)
XLOC_016753 BX511268.2 non-coding downstream 415758 42962228 ~ 42962344 (-)
XLOC_016751 NA non-coding downstream 441864 42935881 ~ 42936238 (-)
XLOC_016749 NA non-coding downstream 606124 42719037 ~ 42771978 (-)
XLOC_016770 NA non-coding upstream 250660 43629753 ~ 43630083 (-)
XLOC_016786 BX323035.1 non-coding upstream 1143763 44522856 ~ 44524381 (-)
XLOC_016787 NA non-coding upstream 1182921 44562014 ~ 44563193 (-)

Expression


Co-expression Network