XLOC_016776 (si:ch211-195h23.4)


Basic Information

Item Value
gene id XLOC_016776
gene name si:ch211-195h23.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 43940925 ~ 43942595 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032888
GTAGCAAGAACGATCGCTGATTCTGTCCGACTGAACAAACTGTCTATATGAAGAAAGACGAACTGAGTTTGGAAAATACCAGTACAACTGTGATGGAGAAGCCAAAGAAAAACCGGCTCTTAAAACTGCCCTCTTTCCTAAAAGCTTCCAAGAAAAACAAGAACTTCCGAAGTCAGAAAGAGACACAGCTCAAGCAAACGCCTGAAATTGGCAATGATTATGAGGTGGAGGAGGTTGAAGGAATGACACAGAGGAAAAAGAGTAAAGTGGCAAATTTCCTCAAAGCTGCCAGAAGACTCTTCAGGATGTCCTGCTTTGGTCAGACTGAGGAGCAGCTCTCTGTCTCTGCAGACTCTGATGACGACATTCTATGCCCATCTGGGTCTGTCCAGAGTCTGGAGGTTGCTTGTGTCATCATTCATAATCATGAAGCGAGTTGTGTGAATGACAACCTAAAGCTGGATGAGAAAGATGACGTGAAGACACATAACACAGAGTGTGTCAAAaaagaggaggaggtggaggagatgGGAATGAATGAAGAGAAGGAAAATGAGGAAAAGATTaagaagaggaggagaaagaGAAATACACAGATAAAAGAGGAAGAGgagaaggaagaggaggaggtggTGAAAGAAGTGATGAAAATAAAAGAGGAGAGTTTgaaagaaaaggaggaggaggataaGAATGAGGCAATGAAGATAAAAGAGAGGATGAATGAAAAAGAAGCAGAAGAGAAGGAACACACGAGGAAGAGAAAGAGGAGAAAGAGAAATTGCAGGATAAAAGTGGAAGAGAAGAAAGAGGAGATTGAGGGAGAGATGAAGATAAAGGAGGAGAggataaaagaaaatgaaaaggagGATAAGAATGAAGAGGAGATGGAGGAAgaaatggaggaggaggaggtagaAAAGCCAAAGGAGAAGAAGAATAAGAGAAACAAGAAAAGAGACAGCAGGAAAAGCAGAAGGATGATGCGGAGGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-175 No description available

Ensembl:

ensembl_id ENSDARG00000093337

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032888 True 993 mRNA 0.42 5 43940925 43942595

Neighbor

gene id symbol gene type direction distance location
XLOC_016775 zeb1a coding downstream 88718 43807230 ~ 43852207 (-)
XLOC_016774 ftr16 coding downstream 195750 43742574 ~ 43745175 (-)
XLOC_016773 kif5ba coding downstream 201185 43705593 ~ 43739740 (-)
XLOC_016772 FO704635.1 coding downstream 242394 43678039 ~ 43698531 (-)
XLOC_016771 itgb1b.2 coding downstream 287597 43638983 ~ 43653328 (-)
XLOC_016777 kirrel1b coding upstream 19031 43961626 ~ 44038776 (-)
XLOC_016778 cadm3 coding upstream 106486 44049081 ~ 44183613 (-)
XLOC_016779 sdhc coding upstream 250057 44192652 ~ 44199840 (-)
XLOC_016780 atp1a2a coding upstream 260480 44203075 ~ 44255537 (-)
XLOC_016781 mpz coding upstream 316887 44259482 ~ 44283554 (-)
XLOC_016770 NA non-coding downstream 310842 43629753 ~ 43630083 (-)
XLOC_016766 NA non-coding downstream 369165 43567145 ~ 43571760 (-)
XLOC_016764 CABZ01058723.1 non-coding downstream 423907 43509502 ~ 43517018 (-)
XLOC_016763 NA non-coding downstream 561832 43378102 ~ 43379093 (-)
XLOC_016755 NA non-coding downstream 953955 42981204 ~ 42986970 (-)
XLOC_016786 BX323035.1 non-coding upstream 580261 44522856 ~ 44524381 (-)
XLOC_016787 NA non-coding upstream 619419 44562014 ~ 44563193 (-)
XLOC_016791 CR788281.2 non-coding upstream 820487 44763082 ~ 44763375 (-)
XLOC_016792 CR788281.1 non-coding upstream 831680 44774275 ~ 44774595 (-)
XLOC_016796 NA non-coding upstream 1101887 45044482 ~ 45045520 (-)

Expression


Co-expression Network