XLOC_016796



Basic Information


Item Value
gene id XLOC_016796
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45044482 ~ 45045520 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033930
GGTTCTTTGAGCGCGCTCTGTGGCATTCGGTACACCTCCCTCACTGGCGGCGCTCCACCACACCAACCAATCACGGTCAACAGCAGCAGTGACATCACACCCATGATTCCACCTGTCCACAGGTGAGGAGAAaagctgttgtttttttcttcagaaagCTTTGAGAAAGTTTTCAAAAGCCCAGCAGCACAAGTATCTCCCACCTCCAGAGCGGCTCAGCTTTCTCCCTCACTCCCTCTCAGAGTATCTGTGAGTGACAGAAGCTGTGCAAACAATGGGAGAGCATGGAGCAGCCCTGCAGATATATGCAAGAGCACTGGAGCTCTCTCCGAGGGGGTGGGCATCAGGGCCAATGCACTCCCAGCTGAATTCATTAAGACGATGAGAAATCAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033930 True 393 lncRNA 0.52 2 45044482 45045520

Neighbor


gene id symbol gene type direction distance location
XLOC_016795 vwa5b2 coding downstream 16728 44984509 ~ 45027754 (-)
XLOC_016794 mul1a coding downstream 72931 44960876 ~ 44971551 (-)
XLOC_016793 camk2n1a coding downstream 98388 44943396 ~ 44946094 (-)
XLOC_016790 ncapd2 coding downstream 266803 44749201 ~ 44777679 (-)
XLOC_016797 NA coding upstream 7017 45052537 ~ 45067186 (-)
XLOC_016798 CR293505.1 coding upstream 28274 45073794 ~ 45073910 (-)
XLOC_016799 NA coding upstream 49497 45095017 ~ 45098398 (-)
XLOC_016800 CU929150.3 coding upstream 53654 45099174 ~ 45099504 (-)
XLOC_016801 eif4e2 coding upstream 71299 45116819 ~ 45135618 (-)
XLOC_016792 CR788281.1 non-coding downstream 269887 44774275 ~ 44774595 (-)
XLOC_016791 CR788281.2 non-coding downstream 281107 44763082 ~ 44763375 (-)
XLOC_016787 NA non-coding downstream 481289 44562014 ~ 44563193 (-)
XLOC_016786 BX323035.1 non-coding downstream 520101 44522856 ~ 44524381 (-)
XLOC_016770 NA non-coding downstream 1414399 43629753 ~ 43630083 (-)
XLOC_016804 dre-mir-181b-1 non-coding upstream 156703 45202223 ~ 45202331 (-)

Expression



Co-expression Network