XLOC_016797


Basic Information

Item Value
gene id XLOC_016797
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45052537 ~ 45067186 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033931
CCTGCAGAAGGGGTTTATGGGTAGGAACTGAGCGTTTTTCGAGCAGTGAATAAGAAGTTTCCAGAGTCATGAGATTCACTGGTTGTGCAGAAGGCTCCACAGATCTGGATGTTGAATCTATATGACCCTGAGGCGATGCCATCATCATGGGACGTCCCGTAACACTGCTTGTGCTTCCTCTGAGGCCTTCATTTATCAGAGTGGTCCAACTTTCAGAAGACCATAGAGCTTCTCCAGAATGGCCAGTGTATTCCTGTTGTCCTGCAGTGGTGGACGTGGTGAAATCTCTCTCAAACAGTTGGTGGTCCAGTTCTGGAATGACAGGAATGCGCAGTGTTTCCAGTTTGGATCGCATGGCAGCAATGGAGGAGCGCAGAGCACTGTCGAACTGCCGGAGAGGACCCAGTCAGAGAAGGCAGTGACCCGTGTGTAGACGCCAGGCTTCCCCTTCTCCCCACAGCCGTCACCCCAAGAGGTGATGCCAAGCAGCTGAAAGCGTCCTGACAAACGGTCCTGGAAGATCAGCGGCCCTCCAGAATCCCCCTATACACACGCAAACAGAGATGAGTGTGATACAGTTCTGCATGGTGTTGATCAGACTGCACTGCAGGACTCGAGCACTGCATCTTTCTCCCATCACTCTCACACAGACGTCTCTGTTCACCTGAGCAGGTGTGCAGCGGCGTCTGTAGAAACCACAGGCCTGACTCAACATCCAGCTCCTCTCGCCTTCGTCCTCCTCCTGCTGAGCAAGTGAGATGAGCTCACAGCTGGGCTCCGACTGTGTGTCTTCTGGAGACGCTACAGAGGAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033931 True 812 lncRNA 0.53 3 45052537 45067186

Neighbor

gene id symbol gene type direction distance location
XLOC_016796 NA coding downstream 7017 45044482 ~ 45045520 (-)
XLOC_016795 vwa5b2 coding downstream 24783 44984509 ~ 45027754 (-)
XLOC_016794 mul1a coding downstream 80986 44960876 ~ 44971551 (-)
XLOC_016793 camk2n1a coding downstream 106443 44943396 ~ 44946094 (-)
XLOC_016792 CR788281.1 coding downstream 277942 44774275 ~ 44774595 (-)
XLOC_016798 CR293505.1 coding upstream 6608 45073794 ~ 45073910 (-)
XLOC_016799 NA coding upstream 27831 45095017 ~ 45098398 (-)
XLOC_016800 CU929150.3 coding upstream 31988 45099174 ~ 45099504 (-)
XLOC_016801 eif4e2 coding upstream 49633 45116819 ~ 45135618 (-)
XLOC_016802 capn10 coding upstream 72284 45139470 ~ 45154622 (-)
XLOC_016791 CR788281.2 non-coding downstream 289162 44763082 ~ 44763375 (-)
XLOC_016787 NA non-coding downstream 489344 44562014 ~ 44563193 (-)
XLOC_016786 BX323035.1 non-coding downstream 528156 44522856 ~ 44524381 (-)
XLOC_016804 dre-mir-181b-1 non-coding upstream 135037 45202223 ~ 45202331 (-)
XLOC_016805 NA non-coding upstream 157936 45225122 ~ 45227245 (-)

Expression


Co-expression Network