XLOC_016817


Basic Information

Item Value
gene id XLOC_016817
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 46863035 ~ 46865562 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033406
ATCTTCTGCTTCATATATTTGAGTATAACAGCTGCTGTTAACCTTGACCTGTGTGCGCAATCACTTAAATGTAAATTAGACTCCAATATTTGAAATTAAATGGCAATTTTCCAGAAGAAATAACTAATTACCTTCCATTTCCCTGGCCAAGCGCTGCCATCAGTCCGTCTGGATTCCTGCCATCCTTGAGCAGACCTcgctagaaaaaaatatatatttccacaTACAAAAAAGTATTGCTGTCCGCTCCCATCTGGCTGACCGATGACTCACACGGAGATGAAGGCAAGGTTAAACCTCAGCGTGAGGAATATGATCTAAAAGAACAAGAGAGCCTTTTATTTTCAAAGCATTTAATTAAATAGAGGCAGGTACTTGTACAGATGTAATATGGGTTAGATGCTAACATGATAAATGTCAGGCTCTTTGTGGAGATGTATTATAAGTACAGCTGTTCAGGACAAATCAACCCTTACCAAAAAGCACTCTTACTGCATAGAAGTACATTTTCATATTGTCTAAGCAACATTCTGAGACCTGCTGTGGATGGAAACTATGACATTGATAATAGAATGCTTAGATGTTAGAGTGGTTTTAGCCTGTCAGggtattttaaaatgttGTTCGCGATCTCATATCAAGACAAAAACAATGCAGAAGACCAATcgtgctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttccatttatccatcatcactttcttctttcttttgatTTCTTTTCCTTTATCCAttcttacatccatccatcctttatttctttccatctatctatacCTCCATGCATCCTTTTTATTCCTTTACTTgattcttttgttttctttccctccctccatccatccatcttattttctttcttcttctcttccttccatccatccatctatccttatttcattccatccatccatccatccatccatccttgcatCTAAAAATTTTtctttcaatccatccatccattcattcattcttccttctgtcattttttttctttccatccactttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcaat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033406 True 1142 lncRNA 0.35 2 46863035 46865562

Neighbor

gene id symbol gene type direction distance location
XLOC_016816 NA coding downstream 828924 46019361 ~ 46034111 (-)
XLOC_016815 CU467828.1 coding downstream 1118056 45744863 ~ 45744979 (-)
XLOC_016814 fam102ba coding downstream 1171907 45665493 ~ 45691128 (-)
XLOC_016813 prpf38b coding downstream 1199090 45655294 ~ 45663945 (-)
XLOC_016812 CR450720.1 coding downstream 1232212 45629707 ~ 45630823 (-)
XLOC_016818 si:ch211-226f6.1 coding upstream 172841 47038403 ~ 47039762 (-)
XLOC_016819 NA coding upstream 225183 47090745 ~ 47099661 (-)
XLOC_016820 FP101908.1 coding upstream 395075 47260637 ~ 47260753 (-)
XLOC_016821 NA coding upstream 476209 47341771 ~ 47344826 (-)
XLOC_016822 BX085193.2 coding upstream 479479 47345041 ~ 47348782 (-)
XLOC_016811 NA non-coding downstream 1306371 45556180 ~ 45556664 (-)
XLOC_016809 NA non-coding downstream 1414744 45427658 ~ 45448291 (-)
XLOC_016808 NA non-coding downstream 1447736 45413601 ~ 45415299 (-)
XLOC_016823 NA non-coding upstream 491759 47357321 ~ 47367152 (-)

Expression


Co-expression Network