XLOC_016819


Basic Information

Item Value
gene id XLOC_016819
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47090745 ~ 47099661 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033407
cccaaactttggaCCGGTAGTTTAtacacttgattttaaaatatcaaaaaacatgcaaaaacatcaaaacataaatttgcattaaaataaCCATTTTTTCCCACATTGTTggttataaaaaacatttatcaaGTTCTAGACTTGAATTATTTCCAGGCCTCTAAAACCACATTGTTGTGTAAATAGATAACCAGAAAACACAAGAAGTTGACATGTTTAGTTGAAAATGAAGTTGTGTAAACTCCTCCAGAAGTGCCCTTGAGTTGCTCTGCTGAATCAAGTAAACTCTTCAAAACCGCTGATGTGTTAATTTGGACTATTGATTCTTAGGTTAGCATGCGCACTGCAGCCATTGTGAGATTTAGGTTCCTCTTTTTCCAGGTGTTTCCCAGTCATTATAACTGTGTAGAACATTGACGTCTTTACCGCCACAGTAATATTTCTTTCAGTTTCCAAGTGAATTTCTAGCTGCTTTGTTGAATGCTGCCTGAGCAGAATCAGTGATGAACCTCCCATCAAACCTCTGATCCATCAGCTCCTTTGaaagattttgtgtttttttcagatGGTGACTGTATGTTGAATGCGTTTAGTGTGATGGATTTTTCTGGAAACCCTGCAGCGCTGCATCCAACGACTGCTGTTCTGCAGAATCGTGAACTGTGGCGTGGTGAAAGCAGGGGTTACGAATCGCTGAAGCCAGAGTCCGGAAACACCGGGCAAGATGGAGGAGCAGATAGGCAGAAGGAATCCCTGCTGGAGCAACCAGTCTCCCCCAGCAGCTCTGCGTTTCTCTTCCCgtatctctttctttctctccccGCCAGCTAAAGAATCCTTTCATCTTGGACTTGTCTCATTTTGCCTTTTCGCACTCTGGCTGACTGCAGTGTTAAATTTTTGTATTGCAAATGAGACTGTCACGCTTCGCAGATATGCAGGCAATTAGCAGCCAACACAGACTCTGTCTTTAAGGCTTTTCATGAAGTATTTGAAAGACAATGGGAACGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033407 True 1011 lncRNA 0.41 2 47090745 47099661

Neighbor

gene id symbol gene type direction distance location
XLOC_016818 si:ch211-226f6.1 coding downstream 50983 47038403 ~ 47039762 (-)
XLOC_016817 NA coding downstream 225183 46863035 ~ 46865562 (-)
XLOC_016816 NA coding downstream 1056634 46019361 ~ 46034111 (-)
XLOC_016815 CU467828.1 coding downstream 1345766 45744863 ~ 45744979 (-)
XLOC_016814 fam102ba coding downstream 1399617 45665493 ~ 45691128 (-)
XLOC_016820 FP101908.1 coding upstream 160976 47260637 ~ 47260753 (-)
XLOC_016821 NA coding upstream 242110 47341771 ~ 47344826 (-)
XLOC_016822 BX085193.2 coding upstream 245380 47345041 ~ 47348782 (-)
XLOC_016823 NA coding upstream 257660 47357321 ~ 47367152 (-)
XLOC_016824 pax3a coding upstream 270662 47370323 ~ 47431205 (-)
XLOC_016811 NA non-coding downstream 1534081 45556180 ~ 45556664 (-)
XLOC_016809 NA non-coding downstream 1642454 45427658 ~ 45448291 (-)
XLOC_016825 BX085193.1 non-coding upstream 332426 47432087 ~ 47464836 (-)

Expression


Co-expression Network