XLOC_016909


Basic Information

Item Value
gene id XLOC_016909
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51483547 ~ 51484324 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033965
CTGGTTCAAGAGCTGAAGCAAGCATGTTGAACAAGGAGTATTTCTGTCTGTGAAAGAACTAGATGAGTTTCTCCACATCATCCTGAAGAATTATCCAATAAGTGTTGAATATTTAAAACCTTATTTTCTGTGTTTGCTTGATGCTTGACAAGATTTAAAGGTACAATATGTATGAACTTTGCATCAAAAAATGCAAACCCCACTAGAACAATACTAAATGTATTGTTGAATTATTCATAAATCCTAAATGTTTCCAACCTTGTTTAGATTCAGAGCTGTGAAATTTGTTACTGTACATCAAGTGAGCAGCTCTCAGAGTTCATTGTGTTGAAATCACCATTGAACGCATgtatgttttctttttacttaaaCATTTGTGGTTATGCATACTCTATGTACTCTATATGTATAGCGAACGTAGGAACTGAGTGCACATTTTACAAGAAAAGATATTGTTAGTGTCAGTCATGTCGTTGTCATTAACATCATTGGTGAACTCTGCAATGAGTCTGATGGGGCAGATGTCTAACtgaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033965 True 535 lncRNA 0.35 2 51483547 51484324

Neighbor

gene id symbol gene type direction distance location
XLOC_016908 LO018493.2 coding downstream 3223 51477200 ~ 51480324 (-)
XLOC_016907 NA coding downstream 6492 51473913 ~ 51477055 (-)
XLOC_016906 si:dkeyp-104b3.1 coding downstream 14791 51461380 ~ 51468756 (-)
XLOC_016905 BX677667.3 coding downstream 25319 51458113 ~ 51458228 (-)
XLOC_016904 si:dkeyp-104b3.2 coding downstream 28679 51451103 ~ 51454868 (-)
XLOC_016910 pigrl2.3 coding upstream 9191 51493515 ~ 51507540 (-)
XLOC_016911 pigrl3.5 coding upstream 15576 51499900 ~ 51500957 (-)
XLOC_016912 pigrl2.3 coding upstream 25339 51509663 ~ 51512294 (-)
XLOC_016913 LO018493.1 coding upstream 35938 51520262 ~ 51521079 (-)
XLOC_016914 si:ch211-9d9.7 coding upstream 108068 51592392 ~ 51593835 (-)
XLOC_016903 BX677667.1 non-coding downstream 54057 51429173 ~ 51429490 (-)
XLOC_016902 BX677667.2 non-coding downstream 67736 51415503 ~ 51415811 (-)
XLOC_016901 NA non-coding downstream 73599 51409231 ~ 51409948 (-)
XLOC_016923 BX908782.1 non-coding upstream 365833 51850157 ~ 51850271 (-)
XLOC_016925 NA non-coding upstream 616666 52100990 ~ 52103610 (-)
XLOC_016926 NA non-coding upstream 717795 52202119 ~ 52204072 (-)
XLOC_016929 NA non-coding upstream 981211 52465535 ~ 52468939 (-)
XLOC_016931 NA non-coding upstream 1143928 52628252 ~ 52681788 (-)

Expression


Co-expression Network