XLOC_016926



Basic Information


Item Value
gene id XLOC_016926
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 52202119 ~ 52204072 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033418
ATTTTATGAAAATTTCAGCAGCAATCCCACAGTTTCAGTTTGAAAGAAATGCACAATTTCAGAGTAATTTCTGACCTTCTTCCTGTGTGAAAGCGATGGCTGATATTTCACCTCCGGTCCGTCGTCCAAACAGACTCACTACTGACAGATTATATGGCACTCCAGGCAGAAGacCTGTAACTACAAAACTTCTTGCAGTTTCATTGAACGGTTCCCAGTACAGATCACTTGGGCCAATGTGAGGCACAGATGTCCACTGCAGCATGAAGCCGCTCTCTGATTGATTCAGAGACGCTGTCCATTCCACCTTAAGCTGAGTCTCATCCAACGGGGTCACGCTGATGTTTTGAGGTGGCGGGAGCTCATCTAGGACAGAAAATGGGAGATGGTTTTAGGATAAATTAACCAAAGTTCCTGAAAATGATgctgtatttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033418 True 435 lncRNA 0.44 2 52202119 52204072

Neighbor


gene id symbol gene type direction distance location
XLOC_016925 NA coding downstream 98509 52100990 ~ 52103610 (-)
XLOC_016924 scn12aa coding downstream 182070 51888033 ~ 52020049 (-)
XLOC_016923 BX908782.1 coding downstream 351848 51850157 ~ 51850271 (-)
XLOC_016922 ly97.3 coding downstream 407647 51790494 ~ 51794472 (-)
XLOC_016921 ly97.2 coding downstream 424881 51774062 ~ 51777238 (-)
XLOC_016927 tle2c coding upstream 127950 52332022 ~ 52365251 (-)
XLOC_016928 chico coding upstream 202493 52406565 ~ 52455525 (-)
XLOC_016929 NA coding upstream 261463 52465535 ~ 52468939 (-)
XLOC_016930 gna11b coding upstream 265782 52469854 ~ 52550135 (-)
XLOC_016931 NA coding upstream 424180 52628252 ~ 52681788 (-)
XLOC_016909 NA non-coding downstream 717795 51483547 ~ 51484324 (-)
XLOC_016907 NA non-coding downstream 725064 51473913 ~ 51477055 (-)
XLOC_016905 BX677667.3 non-coding downstream 743891 51458113 ~ 51458228 (-)
XLOC_016934 NA non-coding upstream 723624 52927696 ~ 52929721 (-)
XLOC_016944 NA non-coding upstream 1949378 54153450 ~ 54155169 (-)
XLOC_016947 FQ378001.1 non-coding upstream 2523234 54727306 ~ 54727426 (-)

Expression



Co-expression Network