XLOC_016943 (CABZ01050249.1)


Basic Information

Item Value
gene id XLOC_016943
gene name CABZ01050249.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 54043678 ~ 54054225 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033099
TTCATCATGGCGCCTGCTGTGTTGTGGTTTTCATTTCTGCTAAATGTGTTTGTACACACTGAAGGATTCACTGAAGTTCAGCCTCTTCCAGATTCATGTTATAAACCGATGAAGGACCACAGACCGTCATTCATAAAgACATATGCCCGTCCACATGAATATTTAAACGTCTCTGATCTCCCCGCCTCCTGGGACTGGCGCAACATTGATGGGAAAAACTATGTGAGCATCACCCGCAACCAACACATCCCACAATACTGTGGCTCATGCTGGGCTATGGGCTCCACTAGTGCTCTCGCAGACCGCATCAACATTAAGAGGAAGGGGGCGTGGCCTTCTGCATACCTGTCAGTGCAGAACGTGATCGACTGTGGCAAGGCGGGGTCATGCTTTGGAGGAGATCATCTGGGTGTTTACGCATATGCAAATGAGCATGGCATTCCTGATGAGACCTGCAATAACTATCAGGCTCGAAACCAAAAATGTGACCCGTTTAATCAGTGTGGGACATGCTCGTTTTTTGGTTCCTGTTCCATTATTAAAAACTACACAGTGTGGAAGGTAGGAGACTACGGGGACATTTCAGGACGAGACCGAATGAAGGCTGAGATCTTTAAAAATGGGCCAATCAGCTGTGCAATAATGGCCACTAAAGGCCTGGAGGCGTATGATGGAGGGGTGTTTGCTGAATTTCACATTCTGTCTATGCCCAATCACATCATCTCAGTGGCGGGATGGGGCGTCACAGAGGACGGGACCGAATACTGGATCGTCAGAAACTCCTGGGGCGAGTTCTGGGGCGAATCAGGCTGGGCCAGGATTGTCACCAGTGCTTATAAAGGAGGAAAAGGAAACTGGTACAATGTCGCCATCGAGAACGACTGTGCATACGGAGATCCAATAGTTACATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099376

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033099 True 912 mRNA 0.49 6 54043678 54054225

Neighbor

gene id symbol gene type direction distance location
XLOC_016942 abhd8a coding downstream 4385 54015958 ~ 54039293 (-)
XLOC_016941 FO834855.1 coding downstream 118370 53909462 ~ 53925308 (-)
XLOC_016940 capsla coding downstream 147378 53890006 ~ 53896300 (-)
XLOC_016939 ccl25a coding downstream 451146 53582357 ~ 53592532 (-)
XLOC_016938 im:7138239 coding downstream 517782 53501750 ~ 53525896 (-)
XLOC_016944 NA coding upstream 99225 54153450 ~ 54155169 (-)
XLOC_016945 napgb coding upstream 310048 54364273 ~ 54387550 (-)
XLOC_016946 acss2l coding upstream 532422 54586647 ~ 54639964 (-)
XLOC_016947 FQ378001.1 coding upstream 673081 54727306 ~ 54727426 (-)
XLOC_016948 NA coding upstream 729599 54783824 ~ 54787578 (-)
XLOC_016934 NA non-coding downstream 1113957 52927696 ~ 52929721 (-)
XLOC_016931 NA non-coding downstream 1361890 52628252 ~ 52681788 (-)
XLOC_016929 NA non-coding downstream 1574739 52465535 ~ 52468939 (-)
XLOC_016926 NA non-coding downstream 1839606 52202119 ~ 52204072 (-)
XLOC_016925 NA non-coding downstream 1940068 52100990 ~ 52103610 (-)
XLOC_016950 NA non-coding upstream 929098 54983323 ~ 54984653 (-)
XLOC_016951 NA non-coding upstream 1005601 55059826 ~ 55071544 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000075_00800884_00806063 NA coding CI01000075 null 800780 ~ 806474 (+)