XLOC_016967 (ctxn1)


Basic Information

Item Value
gene id XLOC_016967
gene name ctxn1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 56430847 ~ 56431298 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033127
TTTGCTCTCCATGTGATTGATCTCAGTGCGATGCAGTGGAAACTGGAGGAATTTTAAGGTGATCTCATGTGGTTTTCCTGAACTGAAGATGAGTGGAAGTCCTCTGATGGAGTACAATCTGCCGTCATCTCTGGCCCCTGTTTCGGACCCCGGGGCCACCGCAGGCCTCCTGCTGGCTCCAGACAGCGAGCAGGGCACGGCGCTCTGTTTTGTGGGTCTCCTGCTGCTGTTTTTGGTGTTTTTACTGGTGCGCTGTTTCCGGATTCTCTTGGACCCGTATAGCAGCATGCCGTCCTCATCGTGGTCAGATCATAAAGACGGACTGGAGAGAGGACAGTTCGATTATGCACTGGTGTAGAGGCTGCTCAGGCAGAGAAATTAAAAACCAAATCCTGTCCAGAGCATATTTTACCTCCAAAGaaaaaaggtacattttaatTGTCaccatttgt

Function

symbol description
ctxn1 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113270

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033127 True 452 mRNA 0.50 1 56430847 56431298

Neighbor

gene id symbol gene type direction distance location
XLOC_016966 cers4b coding downstream 43806 56356652 ~ 56387041 (-)
XLOC_016965 uba52 coding downstream 82120 56339058 ~ 56348727 (-)
XLOC_016964 jund coding downstream 299535 56125174 ~ 56131312 (-)
XLOC_016963 NA coding downstream 335572 56060400 ~ 56095275 (-)
XLOC_016962 CU013534.1 coding downstream 388217 56042512 ~ 56042630 (-)
XLOC_016968 pip5k1cb coding upstream 77153 56508451 ~ 56635782 (-)
XLOC_016969 NA coding upstream 210840 56642138 ~ 56655769 (-)
XLOC_016970 arhgap45a coding upstream 247916 56679214 ~ 56757069 (-)
XLOC_016971 NA coding upstream 377994 56809292 ~ 56884888 (-)
XLOC_016972 NA coding upstream 621721 57053019 ~ 57061935 (-)
XLOC_016956 NA non-coding downstream 679149 55684668 ~ 55751698 (-)
XLOC_016955 NA non-coding downstream 766872 55639371 ~ 55663975 (-)
XLOC_016952 NA non-coding downstream 1206272 55215186 ~ 55224575 (-)
XLOC_016974 dre-mir-7148 non-coding upstream 672103 57103401 ~ 57103485 (-)
XLOC_016976 NA non-coding upstream 771713 57203011 ~ 57204446 (-)

Expression


Co-expression Network