XLOC_017037 (si:ch73-57f22.2)


Basic Information

Item Value
gene id XLOC_017037
gene name si:ch73-57f22.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 17667 ~ 22860 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034030
TAACGTCATCACGCCGCGCCGCGCTCCTGCTTCTGTTTTTATCcggctggagaaagAGACTCCATGAGACCCGTGAATGTGTAATTCTGAAGATGGCGTTGATTAAAGAGGAATGTGAAGACGTGAGGATTGAAGAAGCTTTCAGAGTCAGAGATGAAGATGCGGAGGAACAGACAGATCTGCTGGTGCTGAAGAAAGAGACAGAAGATCTGGAGGACACTAAAGGGAAAGACCCGTTCGGGAGAGAAGAACTGGATGACACAGAAGAGAAAGACCTGTTAGAGGAGCGTCAGGACTTCACCAGCACACACGCAGCAGCTGAGGAGAGCGAGGACTCCATCAGGTTGTGCTGTccgcagtgtggaaagagcttcagcAACAGGGGGAACCTGAAACTGCACCTGATCGTCCACAGTGGGGAGAAGCCCTTCATCTGCCGGCTGTGTGGAAAAAGTTTCTCCAGGAAAGGTAGCCTGAAGACACACATGAGCATCCACAGCGGCGAGCGGCCACACACCTGCTCACAGTGCGGACGCACCTTCAACCTTAAGGGGAACCTGCGGGCTCACTTCAAGGTGCACACCGGCGAGAAGCCCTTCACCTGCGCATGCTGCGGAAAGAGCTTCACACGCAGAGATATCCTGAACAACCACATGACCGTCCATCTGCGGGAGAGCTGTGTGACATGCCACCAGTGCGGCATGAGCTTCAGTAAACACGCTAACCTGAAGgtccacatgagaatccacacatGACGGAAGACTGAGACCATCGACAAGCTTTCGGAGATGAAGCGGCTCTTTATACAGCTGTGGAAACCAGACAGAGATGCCTCTGAACACAGCGCTCAACTCAACACCCACTCTCAATCTGACCTCTGAACTCGACTCTGAACTCTTGAACTCGGAGTTCTTGCACTGGTCGGGTGTTTTTTATCAGATGCTGATGGTTTGGAGGCACTGGCTGCAGAAGGACTAGACTATTCAGCTTAATCAGTGCTGTGTTTACAGCGG

Function

symbol description
si:ch73-57f22.2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087453

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034030 True 1013 mRNA 0.52 3 17667 22860

Neighbor

gene id symbol gene type direction distance location
XLOC_017038 lrfn2b coding downstream 2510 25370 ~ 76300 (+)
XLOC_017039 zgc:112001 coding downstream 65308 88168 ~ 90255 (+)
XLOC_017040 olfcb1 coding downstream 75319 98179 ~ 106012 (+)
XLOC_017041 pcare2 coding downstream 83621 106481 ~ 113317 (+)
XLOC_017042 BX511077.1 coding downstream 149302 172162 ~ 187142 (+)
XLOC_017056 NA non-coding downstream 658987 681847 ~ 682292 (+)
XLOC_017061 NA non-coding downstream 874045 896905 ~ 900380 (+)
XLOC_017065 NA non-coding downstream 1177432 1200292 ~ 1203874 (+)
XLOC_017070 NA non-coding downstream 1331803 1354663 ~ 1355683 (+)
XLOC_017074 NA non-coding downstream 1640899 1663759 ~ 1725048 (+)

Expression


Co-expression Network