XLOC_017064 (lyrm2)


Basic Information

Item Value
gene id XLOC_017064
gene name lyrm2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 1196386 ~ 1199009 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034074
ATTCCCTCCCACCACTTTCCTGCAGAGGAAAGAACATGGCGGTGTCTCGGTTACCACCAGCGGCTCTGAGTCTCAAACAGTTTCTGCAGAGACAGAAGGTGCTGTGTTTGTACAGAGATCTGCAGCGCACCATCCGCAGGGTCCCGCACGAGTCTGACCGCAAATACCTGCGAGACTGGGCCCGAGACGAGTTCAGGAGGAACAAGAGCAACACAGACCAGGATGCCATCCGCATGATGATCAGTCAAGCGCACAATCATCTGGAGGAGTTGAGGAGATCTCTGGCTCTGGCTGGATGCTGAAACTCTGCTGAAAACCCAGACTACAATGAGGACACACacatctgtatttatttatcatgcaCACGTTTATTAATAAAACCCAGCTTAACAAACTCACTTCATATAGACTCTGTGTGTAGTTGCGTCTTTTCAGTACGGCTCCAGTCTAACGCCCCGTCCTGGTGTCCACGTCTGATTACATTTACAGATCAGGTTTATGTAGAAAGCTTGAATACTTCTGGTGTTATTGATGATTATCacacggctgtctggaatactggattctgattggtcagtcgtgacattacaaagtatgttattcccagataacaaccactgaataACACAGACTCATCCTGGAACTGAGAATCACCATCAGTGAATATGTTCACATCCATATACTTACATCCACACTCATGTgtgtgcagtaggtagtgctgtcgcctcacagcaagaaggtcgctggttcgaacctcggctcagttggcgtttctgtgtggagtttgcttgttctccctgccttaggtgggtttcctccgggtgctccggtttcccccacagtccaaacacatgcggtacaggtgaattgggtaggctaaattgtccgtagtgtatgagtgtgtgtgtgtgaatgtgtgtgtggatgtttcccagagatgggttgcggctggaagggcatccgctgcgtaaaaaacttg

Function

symbol description
lyrm2 Orthologous to human LYRM2 (LYR motif containing 2).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040914-27 Orthologous to human LYRM2 (LYR motif containing 2).

Ensembl:

ensembl_id ENSDARG00000033138

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034074 True 979 mRNA 0.49 3 1196386 1199009

Neighbor

gene id symbol gene type direction distance location
XLOC_017063 pnrc1 coding upstream 70991 1121458 ~ 1125395 (+)
XLOC_017062 BX537249.1 coding upstream 106783 1088658 ~ 1089603 (+)
XLOC_017061 NA coding upstream 296006 896905 ~ 900380 (+)
XLOC_017060 nt5e coding upstream 348318 826459 ~ 848068 (+)
XLOC_017059 mei4 coding upstream 373110 812012 ~ 823276 (+)
XLOC_017065 NA coding downstream 1283 1200292 ~ 1203874 (+)
XLOC_017066 hsd3b2 coding downstream 73517 1272526 ~ 1276175 (+)
XLOC_017067 lrp11 coding downstream 79175 1278184 ~ 1287799 (+)
XLOC_017068 nup43 coding downstream 117486 1316495 ~ 1327859 (+)
XLOC_017069 tab2 coding downstream 130500 1329509 ~ 1350296 (+)
XLOC_017056 NA non-coding upstream 514094 681847 ~ 682292 (+)
XLOC_017070 NA non-coding downstream 155654 1354663 ~ 1355683 (+)
XLOC_017074 NA non-coding downstream 464750 1663759 ~ 1725048 (+)
XLOC_017082 NA non-coding downstream 1014680 2213689 ~ 2214421 (+)
XLOC_017084 BX681416.1 non-coding downstream 1062924 2261933 ~ 2266612 (+)

Expression


Co-expression Network