XLOC_017088


Basic Information

Item Value
gene id XLOC_017088
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 2506900 ~ 2508095 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036363
ctatcagacatttagggtggTACTATGTGTCCTTTAGGGCAGGcctatcagacatttagggcggTACTATGTGTCCTTTAGGGCAGGCCTATAAGACATTTAGGGTGGTACTATGTgccctttagggcagggctatcagacatttagggcggTACTATGTgccctttagggcagggctatcagacatttagggcggTACTATgtgtcctttagggcagggctatcagacatttagggtgctgctatcagtcatttagggtggagctattagtcatttagggcggtaCTATGCATCCCTTAGGGCAGGGCTGGCAGTCATTTAGGGTGGTGCTatgagtcatttagggcagagctatcactAATTTAGGGCGGAGATATAAGTctcagggtggagctatcagtcatttaggggagGTGCAATGCgccctttagggtggggctataagttatttagggtggagctatcagtcatttagggcggcgctatcagtcatttagggtggagctatcagtcacttagggtggagctatcaatcatttagggcggTGCTTAGTCATttggggtggagctattagtcatttggggtagagctatcagtcatttagggcgctgctatcagacatttagggtggagctattagtcatttagtgtaaagctatcaatcatttagggtggagctttcCATCATTTAAGATGGTTCTATGAgtgctttagggcagagctatctgtcttttagggtggagctatgaTTCCTTTAGAATGGGGCTATCatttctttagggtggagctattattCACTTAAGGTGGTGCTATGAGTCCTTCAGGCGCAGAGCTATCGCTCCTTAAGgttggagctatcagtcatttatggtGGGGCattcagtaatttagggtggagctatcagtcatttggggcagCACTATGCGTTCTTTAGGGCAGGggtattagtcatttagggtggggctatcagacatttagggcaGGACTGTCAGTCTTTTAGGGAGGCTTTTcatcatttagggtggagctatgagTTATTTAAgatggagctatcagtcttttaggatgGGGATATTAGTGCAGGTCCTGTTTATGCTCTGCTTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036363 True 1108 lncRNA 0.46 2 2506900 2508095

Neighbor

gene id symbol gene type direction distance location
XLOC_017087 NA coding upstream 25085 2480910 ~ 2481815 (+)
XLOC_017086 akap7 coding upstream 27450 2460864 ~ 2479450 (+)
XLOC_017085 NA coding upstream 222087 2281624 ~ 2284813 (+)
XLOC_017084 BX681416.1 coding upstream 240288 2261933 ~ 2266612 (+)
XLOC_017083 tmem200a coding upstream 264946 2227860 ~ 2241954 (+)
XLOC_017089 il20ra coding downstream 81319 2589414 ~ 2609270 (+)
XLOC_017090 zgc:101562 coding downstream 134760 2642855 ~ 2647566 (+)
XLOC_017091 slc35a1 coding downstream 160922 2669017 ~ 2679683 (+)
XLOC_017092 syncrip coding downstream 223341 2731436 ~ 2745385 (+)
XLOC_017093 CABZ01027815.1 coding downstream 400456 2908551 ~ 2908665 (+)
XLOC_017082 NA non-coding upstream 292479 2213689 ~ 2214421 (+)
XLOC_017074 NA non-coding upstream 781852 1663759 ~ 1725048 (+)
XLOC_017097 NA non-coding downstream 804567 3312662 ~ 3315637 (+)
XLOC_017099 LO018608.1 non-coding downstream 895552 3403647 ~ 3416581 (+)
XLOC_017107 CABZ01067980.1 non-coding downstream 1796362 4304457 ~ 4307735 (+)
XLOC_017108 CABZ01067979.1 non-coding downstream 1801426 4309521 ~ 4318473 (+)

Expression


Co-expression Network